Job Description P0CF09 Confidence 93.36% Date Thu Jan 5 11:30:42 GMT 2012 Rank 75 Aligned Residues 41 % Identity 15% Template c1i3qI_ PDB info PDB header:transcription Chain: I: PDB Molecule:dna-directed rna polymerase ii 14.2kd PDBTitle: rna polymerase ii crystal form i at 3.1 a resolution Resolution 3.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		M	A	S	V	S	I	S	C	P	S	C	S	A	T	D	G	V	V	R	N	G	K	S	T	A	G	.	.	.	.	H	Q	R	Y	L	C	S	H	C	R	K	T	W	Q	L
Query Conservation																												.	.	.	.
Alig confidence																												.	.	.	.
Template Conservation
Template Sequence		L	P	R	S	D	R	E	C	P	K	C	H	S	R	E	N	V	F	F	Q	S	Q	Q	R	R	K	D	T	S	M	V	L	F	F	V	C	L	S	C	S	H	I	F	T	S
Template Known Secondary structure		S								T	T	T			S		B						S				S	S									B	T	T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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