Return to main results Retrieve Phyre Job Id

Job DescriptionP77539
Confidence54.67%DateThu Jan 5 12:30:22 GMT 2012
Rank337Aligned Residues113
% Identity18%Templatec3mb5A_
PDB info PDB header:transferaseChain: A: PDB Molecule:sam-dependent methyltransferase; PDBTitle: crystal structure of p. abyssi trna m1a58 methyltransferase in complex2 with s-adenosyl-l-methionine
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190......... 200.........210.........220.........230.........240
Predicted Secondary structure 














..


















Query SS confidence 




































. .








































Query Sequence  YKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGA. . VNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQ
Query Conservation                  
    
 

      
   

..  
                                      
Alig confidence 






















.












..




































...
Template Conservation     
   
 
 

  


 
 

.
  
  

      
 
   
        
  
         
     
   ... 
Template Sequence  AALIVAYAGISPGDFIVEAGVGS. GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE. . . G
Template Known Secondary structure  TT

TT


TT.S
TTS
S
T
TTT
S
GGG...
Template Predicted Secondary structure 










.













...
Template SS confidence 















































































   82.......90.........100.... .....110.........120.........130.........140.........150...... .
 
   241........250.........260.........270.........
Predicted Secondary structure 
















Query SS confidence 






































Query Sequence  ICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMG
Query Conservation                                      
  
Alig confidence 






































Template Conservation        
 
 

 
     
      




 

   
 
Template Sequence  IEEENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTPC
Template Known Secondary structure 



S
SS
GGGGSS
Template Predicted Secondary structure 

















Template SS confidence 






































   158.160.........170.........180.........190......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions