Job Description P77539 Confidence 99.81% Date Thu Jan 5 12:30:22 GMT 2012 Rank 85 Aligned Residues 302 % Identity 15% Template c2vz8B_ PDB info PDB header:transferase Chain: B: PDB Molecule:fatty acid synthase; PDBTitle: crystal structure of mammalian fatty acid synthase Resolution 3.2 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.																																																					.
Query SS confidence														.	.	.																																																					.
Query Sequence		G	G	Y	K	M	I	D	V	P	Q	P	M	.	.	.	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	D	E	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K	.	D	W	K	V	G	Q	R	V	V	S	D	N
Query Conservation														.	.	.																																																					.
Alig confidence														.	.	.																													.	.	.	.																					.
Template Conservation																																													.	.	.	.
Template Sequence		S	S	I	R	W	V	C	S	P	L	H	Y	A	L	P	A	S	C	Q	D	R	L	C	S	V	Y	Y	T	S	L	N	F	R	D	V	M	L	A	T	G	K	L	S	.	.	.	.	P	D	S	I	P	G	K	W	L	T	R	D	C	M	L	G	M	E	F	S	G	R	D	A	S	G	R	R	V	M	G	M	V
Template Known Secondary structure		T	S							G	G	G	G				T	T	S	T	T	T																			T	S	S		.	.	.	.	G	G	G			S			S		S	S												T	T
Template Predicted Secondary structure																																													.	.	.	.
Template SS confidence
		1542	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.					.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610	.	.	.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A	V	L	D	P	I	C	N	A	Y	K	S	I	A
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	G	L	A	T	S	V	L	L	L	Q	H	A	T	W	E	.	.	.	.	.	.	.	V	P	S	T	W	T	L	E	E	A	A	S	V	P	I	V	Y	T	T	A	Y	Y	S	L
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S			S	B	S						G	G	G				.	.	.	.	.	.	.			T	T	S						T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		1618																																.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.								.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.
		168	.			170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		Q	Q	.	.	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V	V	A	R	C	Q	Q	I	C	G	K	D
Query Conservation				.	.
Alig confidence				.	.
Template Conservation
Template Sequence		V	V	R	G	R	M	Q	P	G	E	S	V	L	I	H	S	G	S	G	G	V	G	Q	A	A	I	A	I	A	L	S	R	G	C	R	V	F	T	T	V	G	S	A	E	K	R	A	Y	L	Q	A	R	F	P	Q	L	D	E	T	C	F	A	N	S	R	D	T	S	F	E	Q	H	V	L	R	H	T	A	G	K
Template Known Secondary structure		T	T	T	T				T	T								S	S	S													T	T								S													T	T			S	T	T				S	S	S	S									T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.		.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.										.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																																												.																		.	.	.	.	.	.	.	.	.
Query SS confidence																																												.																		.	.	.	.	.	.	.	.	.
Query Sequence		N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	M	G	F	K	P	L	D	F	S	I	.	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D	.	.	.	.	.	.	.	.	.	S	T	S	W	R	N	A	I	R	L	L
Query Conservation																																												.																		.	.	.	.	.	.	.	.	.
Alig confidence										.																																		.																		.	.	.	.	.	.	.	.	.
Template Conservation										.
Template Sequence		G	V	D	L	V	L	N	S	.	L	A	E	E	K	L	Q	A	S	V	R	C	L	A	Q	H	G	R	F	L	E	I	G	K	F	D	L	S	N	N	H	A	L	G	M	A	V	F	L	K	N	V	T	F	H	G	I	L	L	D	S	L	F	E	E	G	G	A	T	W	Q	E	V	S	E	L	L	K	A	G	I
Template Known Secondary structure										.											T	T																	T	T					T	T	G	G	G	G	T								T					T	S
Template Predicted Secondary structure										.
Template SS confidence
		1740	.	.	.	.	.	.	.		.	.	1750	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.	.	.	.	.	.	.	1810	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		A	S	G	A	I	K	V	K	P	M	I	T	H	R	I	G	L	S	Q	W	R	E	G	F	D	A	M	V	D	K	T	A	.	I	K	V	I	M	T	Y	D	F	D	E
Query Conservation																																		.
Alig confidence												.	.																					.
Template Conservation												.	.
Template Sequence		Q	E	G	V	V	Q	P	L	K	C	.	.	T	V	F	P	R	T	K	V	E	A	A	F	R	Y	M	A	Q	G	K	H	I	G	K	V	V	I	Q	V	R	E	E	E
Template Known Secondary structure		T	T	T		S						.	.					S	S	T										T	T			S	S						S	S
Template Predicted Secondary structure												.	.
Template SS confidence
		1819	1820	.	.	.	.	.	.	.	.			.	1830	.	.	.	.	.	.	.	.	.	1840	.	.	.	.	.	.	.	.	.	1850	.	.	.	.	.	.	.	.	.	1860

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions