Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 57 Aligned Residues 314 % Identity 17% Template c2vn8B_ PDB info PDB header:receptor inhibitor Chain: B: PDB Molecule:reticulon-4-interacting protein 1; PDBTitle: crystal structure of human reticulon 4 interacting protein2 1 in complex with nadph Resolution 2.1 Å

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		1	.	.	.	.	.	.	.	.	10		.	.	.	.	.	.		.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.																.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure												.							.									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.							.									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	A	L	A	R	F	G	K	A	.	F	G	G	Y	K	M	.	I	D	V	P	Q	P	M	C	.	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	F	N	S	I	R	G	H	E
Query Conservation												.							.									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.							.									.																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	M	A	W	V	I	D	K	Y	G	K	N	E	V	L	R	F	T	Q	N	M	M	M	P	I	I	H	Y	P	N	E	V	I	V	K	V	H	A	A	S	V	N	P	I	D	V	N	M	R	S	G	Y	G	A	T	A	L	N	M	K	R	D	P	L	H	V	K	I	K	G	E	E	F	P	L	T	L	G	R	D
Template Known Secondary structure							B	S	S		S	S	G	G	G														S	T	T																				T	T	T	T										T	T			S		T	T	T	T		S	B
Template Predicted Secondary structure
Template SS confidence

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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