Return to main results Retrieve Phyre Job Id

Job DescriptionP77539
Confidence100.00%DateThu Jan 5 12:30:22 GMT 2012
Rank12Aligned Residues347
% Identity28%Templatec2ouiB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:nadp-dependent alcohol dehydrogenase; PDBTitle: d275p mutant of alcohol dehydrogenase from protozoa entamoeba2 histolytica
Resolution1.77 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 








































Query SS confidence 















































































Query Sequence  MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVG
Query Conservation 


          
     
 
     





 
  

  
     
       
 
 
 
  
 

 

  
    

Alig confidence 









..



































































Template Conservation 


 
     .. 
   
 
 
     





 
 


  
     
       
 
 
 
  
 

 

  
    

Template Sequence  MKGLAMLGIG. . RIGWIEKKIPECGPLDALVRPLALAPCTSDTHTVWAGAIGDRHDMILGHEAVGQIVKVGSLVKRLKVG
Template Known Secondary structure 
TT..






TT



T
TT


SS




TT

S

TT
Template Predicted Secondary structure 



..
































Template SS confidence 















































































   1........10 .........20.........30.........40.........50.........60.........70........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 
























































Query SS confidence 















































































Query Sequence  QRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPIC
Query Conservation 


                                     
  
 
  
              

               
Alig confidence 





.
















































.....


















Template Conservation 


   .                                                 .....                   
Template Sequence  DKVIVP. AITPDWGEEESQRGYPMHSGGMLGGWKFSNFKDGVFSEVFHVNEADANL. . . . . ALLPRDIKPEDAVMLSDMV
Template Known Secondary structure 

.S



TTSTT
GGGTTSTTTT

BTTTB

SSBSSSS
.....

TTS
GGGTT
Template Predicted Secondary structure 
.

































.....












Template SS confidence 















































































   7980.... .....90.........100.........110.........120.........130... ......140.........150..
 
   161........170.........180.........190.........200.........210.........220.........230.........240
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  NAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQQ
Query Conservation                    
    
 

      
   

  
                                      
Alig confidence 















































...




























Template Conservation                                                  ...                             
Template Sequence  TTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSR. . . KHCCDIALEYGATDIINYKNGDIVEQILK
Template Known Secondary structure  TT

TT



STTT
SS


...TT


GGGS
Template Predicted Secondary structure 


























...








Template SS confidence 















































































   153......160.........170.........180.........190.........200 .........210.........220.........
 
   241........250.........260.........270......... 280.........290.........300..... ....310.....
Predicted Secondary structure 
















....












.
Query SS confidence 






































. . . .

























.









Query Sequence  ICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMG. . . . FKPLDFSINDITAWNKSIIGHMAYDS. TSWRNAIRLL
Query Conservation                                      
  ....                 
 
      .        

Alig confidence 






































....

























.









Template Conservation                                                                          
     

Template Sequence  ATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIPIPRSEWGVGMGHKHIHGGLTPGGRVRMEKLASLI
Template Known Secondary structure  TTTS

SS
TT




S
S




TTTTGGGTS





Template Predicted Secondary structure 































Template SS confidence 















































































   230.........240.........250.........260.........270.........280.........290.........300.........
 
   316...320.........330 .........340....... ..350........
Predicted Secondary structure 








.



..




Query SS confidence 














.
















. .










Query Sequence  ASGAIKVKPMITHRI. GLSQWREGFDAMVDKTA. . IKVIMTYDFDE
Query Conservation    
 
     
    . 
     
         ..




      
Alig confidence 














.
















..










Template Conservation    
 
     
      

    
   
       




      
Template Sequence  STGKLDTSKLITHRFEGLEKVEDALMLMKNKPADLIKPVVRIHYDD
Template Known Secondary structure  TTS


GGGSTT

TT
S


TT
Template Predicted Secondary structure 


















Template SS confidence 













































   310.........320.........330.........340.........350.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions