Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 37 Aligned Residues 314 % Identity 23% Template c2h6eA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-arabinose 1-dehydrogenase; PDBTitle: crystal structure of the d-arabinose dehydrogenase from sulfolobus2 solfataricus Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.			.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		M	K	A	L	A	R	F	G	K	A	F	G	G	Y	K	M	I	D	V	P	Q	P	M	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	D	.	.	E	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K	D	W	K
Query Conservation																																																							.	.
Alig confidence												.	.	.	.	.	.																																						.	.																			.
Template Conservation												.	.	.	.	.	.																																																										.
Template Sequence		S	K	A	A	L	L	K	K	F	S	.	.	.	.	.	.	E	D	V	N	I	P	E	P	Q	G	E	E	V	L	I	R	I	G	G	A	G	V	C	R	T	D	L	R	V	W	K	G	V	E	A	K	Q	G	F	R	L	P	I	I	L	G	H	E	N	A	G	T	I	V	E	V	G	.	E	L	A	K	V	K
Template Known Secondary structure				B					S			.	.	.	.	.	.										T	T																				T	T	S				T	T			S	S																.	T	T
Template Predicted Secondary structure												.	.	.	.	.	.																																																										.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.							.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q	R	V	V	S	D	N	S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A	V	L	D	P
Query Conservation
Alig confidence										.																													.	.	.																								.	.	.
Template Conservation										.																													.	.	.																								.	.	.
Template Sequence		K	G	D	N	V	V	V	Y	.	A	T	W	G	D	L	T	C	R	Y	C	R	E	G	K	F	N	I	C	K	N	Q	I	I	P	G	Q	T	.	.	.	T	N	G	G	F	S	E	Y	M	L	V	K	S	S	R	W	L	V	K	L	N	S	L	.	.	.	S	P	V	E	A	A	P	L	A	D	A	G	T	T
Template Known Secondary structure		T	T							.	S		B			S		S	T	T	G	G	G	T		G	G	G		T	T		B		B	T	T	T	.	.	.	B			S	S	B	S					S		G	G	G					S	S	S	.	.	.						G	G	G	G	T
Template Predicted Secondary structure										.																													.	.	.																								.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140				.	.	.	.	.	.	.	.	.	150	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	C	N	A	Y	K	S	I	A	Q	Q	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V	V	A	R	C
Query Conservation
Alig confidence																																																																					.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		S	M	G	A	I	R	Q	A	L	P	F	I	S	K	F	A	E	P	V	V	I	V	N	G	I	G	G	L	A	V	Y	T	I	Q	I	L	K	A	L	M	K	N	I	T	I	V	G	I	S	R	S	K	K	H	R	D	F	A	L	E	L	G	A	D	Y	V	S	.	.	.	.	E	M	K	D	A	E	S	L	I
Template Known Secondary structure														T	T		S	S									S															T	T								S												T		S				.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.					.	.	.	.	.	.	.	.	230
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	I	C	G	K	D	N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	M	G	F	K	P	L	D	F	S	I	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D	S	T	S	W	R	N	A	I	R	L	L	A	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	K	L	T	D	G	L	G	A	S	I	A	I	D	L	V	G	T	E	E	T	T	Y	N	L	G	K	L	L	A	Q	E	G	A	I	I	L	V	G	M	E	G	K	R	V	S	L	E	A	F	D	T	A	V	W	N	K	K	L	L	G	S	N	Y	G	S	L	N	D	L	E	D	V	V	R	L	S	E	S	G
Template Known Secondary structure						T	T									S	S																										S	S												T	T								S															T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	K	V	K	P	M	I	T	H	R	I	G	L	S	Q	W
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		K	I	K	P	.	.	.	Y	I	I	K	V	P	L	G	R	Q
Template Known Secondary structure		S	S			.	.	.
Template Predicted Secondary structure						.	.	.
Template SS confidence
		311	.	.	.				.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions