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Job DescriptionP77539
Confidence100.00%DateThu Jan 5 12:30:22 GMT 2012
Rank16Aligned Residues340
% Identity21%Templatec2cf5A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:cinnamyl alcohol dehydrogenase; PDBTitle: crystal structures of the arabidopsis cinnamyl alcohol2 dehydrogenases, atcad5
Resolution2.0 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVG
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Template Sequence  TTGWAARDPS. GILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGSDVSKFTVG
Template Known Secondary structure 
STT.






TT
T
TTT


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SS

S

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   10......... 20.........30.........40.........50.........60.........70.........80........
 
   81........90.........100.........110.... .....120.........130.........140.........150......
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Query Sequence  QRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGL. . . . DNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVL
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Template Sequence  DIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGM. . . . . . AVEQAAPLL
Template Known Secondary structure 

S

SSSTT
GGG
TT
TTTSB
TTS
B


SSBS
GGG

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TGGG
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   8990.........100.........110.........120.........130.........140.........150... ......160..
 
   157..160.........170.........180.........190.........200.........210.........220.........230......
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Query Sequence  DPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVA
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Template Sequence  CAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSN. . . KKREEALQDLGADDYVIGSDQAKMS
Template Known Secondary structure  TTSTTSTT


ST
SST...TTTS

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   163......170.........180.........190.........200.........210.... .....220.........230.........
 
   237..240.........250.........260.........270.........280.........290.........300.........310......
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Query Sequence  RCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLA
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Template Sequence  ELA. . . . . DSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCK
Template Known Secondary structure  ST.....TT


S


STT
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T


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   240.. .......250.........260.........270.........280.........290.........300.........310....
 
   317..320.........330.........340....... ..350........
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Query Sequence  SGAIKVKPMITHRIGLSQWREGFDAMVDKTA. IKVIMTYDFDE
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Template Sequence  EKGLSS. . . IIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSN
Template Known Secondary structure  TT


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GGGTT
SSSTTS

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   315....320 .........330.........340.........350....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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