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Job DescriptionP77539
Confidence100.00%DateThu Jan 5 12:30:22 GMT 2012
Rank13Aligned Residues339
% Identity18%Templatec2cdaA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:glucose dehydrogenase; PDBTitle: sulfolobus solfataricus glucose dehydrogenase 1 in complex2 with nadp
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKALARFGKAFGGYKMIDVPQPM. CGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKV
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Template Sequence  MKAIIVKPPN. AGVQVKDVDEKKLDSYGKIKIRTIYNGICGTDREIVNGKLKGK. DFLVLGHEAIGVVEESYH. . . GFSQ
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TTS.




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Query Sequence  GQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPI
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Template Sequence  GDLVMP. VNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVK. . . . . . . IPKSIEDIGILAQPLA
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SSSTT
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GGGTTTGGG
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Query Sequence  CNAYKSIAQ. . . . . . . . . . . . QSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVV
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Template Sequence  DIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNS
Template Known Secondary structure  GGGSS

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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
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Query Sequence  NGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKP. . . . LDFSINDITAWNKSIIGHMAY
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Template Sequence  SNGYDKLKDSV. . . . . GKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNG
Template Known Secondary structure  TT
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Query Sequence  DSTSWRNAIRLLASGAI. . . . KVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTYDFD
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Template Sequence  QKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE
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STTS

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   309310.........320.........330.........340.........350.........360......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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