Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 48 Aligned Residues 311 % Identity 15% Template c2c0cB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:zinc binding alcohol dehydrogenase, domain PDBTitle: structure of the mgc45594 gene product Resolution 1.45 Å

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		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure													.	.	.							.																																					.
Query SS confidence													.	.	.							.																																					.
Query Sequence		M	K	A	L	A	R	F	G	K	A	F	.	.	.	G	G	Y	K	M	I	.	D	V	P	Q	P	M	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	D	.	E	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K
Query Conservation													.	.	.							.																																					.
Alig confidence													.	.	.							.																																					.
Template Conservation
Template Sequence		M	Q	K	L	V	V	T	R	L	S	P	N	F	R	E	A	V	T	L	S	R	D	C	P	V	P	L	P	G	D	G	D	L	L	V	R	N	R	F	V	G	V	N	A	S	D	I	N	Y	S	A	G	R	Y	D	P	S	V	K	P	P	F	D	I	G	F	E	G	I	G	E	V	V	A	L	G	L	S	A	S
Template Known Secondary structure									S			S	S																		T	T													T	T						T	T	T	T		T	T			S						S											T	T	S
Template Predicted Secondary structure
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		76		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		D	.	W	K	V	G	Q	R	V	V	S	D	N	S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A
Query Conservation			.
Alig confidence			.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	R	Y	T	V	G	Q	A	V	A	Y	M	A	P	G	S	F	A	E	Y	T	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	S	I	A	T	P	V	P	S	V	K	P	E	Y	L	T	L
Template Known Secondary structure		T	T			T	T								S			S	B	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G					S	S
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																																								.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	D	P	I	C	N	A	Y	K	S	I	A	Q	Q	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V
Query Conservation
Alig confidence																																																						.	.	.	.
Template Conservation																																																						.	.	.	.
Template Sequence		L	V	S	G	T	T	A	Y	I	S	L	K	E	L	G	G	L	S	E	G	K	K	V	L	V	T	A	A	A	G	G	T	G	Q	F	A	M	Q	L	S	K	K	A	K	C	H	V	I	G	T	C	S	.	.	.	.	S	D	E	K	S	A	F	L	K	S	L	G	C	D	R	P	I	N	Y	K	T	E	P	V
Template Known Secondary structure			T													T				T	T						T	T	T	T	B	T	T											T	T								S	.	.	.	.	S										T	T		S					T	T	T	S
Template Predicted Secondary structure																																																						.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.					.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.											.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		V	A	R	C	Q	Q	I	C	G	K	D	N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	M	G	F	K	P	L	D	F	.	.	.	.	.	.	.	.	.	.	S	I	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.																													.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		G	T	V	L	K	Q	E	Y	P	E	G	V	D	V	V	Y	E	S	V	G	G	.	.	A	M	F	D	L	A	V	D	A	L	A	T	K	G	R	L	I	V	I	G	F	I	S	G	Y	Q	T	P	T	G	L	S	P	V	K	A	G	T	L	P	A	K	L	L	K	K	S	A	S	V	Q	G	F	F	L	N	H
Template Known Secondary structure										T	T									S			.	.																						G	G	G	T	T	S	S	S	S							T	T									T								G	G	G
Template Predicted Secondary structure																							.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
							305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.							.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																				.	.	.	.	.	.																									.
Query SS confidence		.	.	.	.	.																				.	.	.	.	.	.																									.
Query Sequence		.	.	.	.	.	S	T	S	W	R	N	A	I	R	L	L	A	S	G	A	I	K	V	K	.	.	.	.	.	.	P	M	I	T	H	R	I	G	L	S	Q	W	R	E	G	F	D	A	M	V	D	K	T	A	.	I	K	V	I	M	T	Y	D	F
Query Conservation		.	.	.	.	.																				.	.	.	.	.	.																									.
Alig confidence		.	.	.	.	.																				.	.	.	.	.	.																									.
Template Conservation
Template Sequence		Y	L	S	K	Y	Q	A	A	M	S	H	L	L	E	M	C	V	S	G	D	L	V	C	E	V	D	L	G	D	L	S	P	E	G	R	F	T	G	L	E	S	I	F	R	A	V	N	Y	M	Y	M	G	K	N	T	G	K	I	V	V	E	L	P	H
Template Known Secondary structure			G	G	G														T	T	S	S							S	T	T	S	T	T		S		B	S	G	G	G										T	T				B
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions