Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 56 Aligned Residues 306 % Identity 13% Template c1zsvB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:nadp-dependent leukotriene b4 12- PDBTitle: crystal structure of human nadp-dependent leukotriene b4 12-2 hydroxydehydrogenase Resolution 2.30 Å

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		1	.	.	.	.	.	.	.						.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		M	K	A	L	A	R	F	G	.	.	.	.	.	K	A	F	G	G	Y	K	M	I	D	V	P	Q	P	M	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	D	E	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																																									.	.	.																							.	.
Template Conservation																																																							.	.	.																							.	.
Template Sequence		T	K	T	W	T	L	K	K	H	F	V	G	Y	P	T	N	S	D	F	E	L	K	T	S	E	L	P	P	L	K	N	G	E	V	L	L	E	A	L	F	L	T	V	D	P	Y	M	R	V	A	A	K	R	.	.	.	L	K	E	G	D	T	M	M	G	Q	Q	V	A	K	V	V	E	S	K	N	V	A	.	.
Template Known Secondary structure								S	S			S	S	S			G	G	G													T	T													T						G	G	G	.	.	.	S		T	T		B													S		T	T	.	.
Template Predicted Secondary structure																																																							.	.	.																							.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	W	K	V	G	Q	R	V	V	S	D	N	S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A	V
Query Conservation
Alig confidence		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Conservation		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template Sequence		.	L	P	K	G	T	I	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	P	G	W	T	T	H	S	I	S	D	G	K	D	L	E	K	L	L	T	E	W	P	.	D	T	I	P	L	S	L	A	L	G	T	V
Template Known Secondary structure		.	S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	B	S						S	T	T						T	T			.	T	T	S		G	G	G	G	G	T	T	T
Template Predicted Secondary structure		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.
Template SS confidence
			79	80	.	.	.	.	.	.																																			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	P	I	C	N	A	Y	K	S	I	A	Q	Q	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V	V
Query Conservation
Alig confidence																																																																														.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		G	M	P	G	L	T	A	Y	F	G	L	L	E	I	C	G	V	K	G	G	E	T	V	M	V	N	A	A	A	G	A	V	G	S	V	V	G	Q	I	A	K	L	K	G	C	K	V	V	G	A	V	G	S	D	E	K	V	A	Y	L	Q	K	L	G	F	D	V	V	F	N	Y	K	T	V	E	S	.	.	.	.
Template Known Secondary structure		S												T	T	S				S	S						S	S	T	T	S	T	T											T	T								S	S										T	T		S					T	T	T		S		.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.								.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.	.	.																												.	.	.	.
Query SS confidence																																												.	.	.	.	.	.	.																												.	.	.	.
Query Sequence		A	R	C	Q	Q	I	C	G	K	D	N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	.	.	.	.	.	.	.	M	G	F	K	P	L	D	F	S	I	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D	.	.	.	.
Query Conservation																																												.	.	.	.	.	.	.																												.	.	.	.
Alig confidence																																												.	.	.	.	.	.	.																												.	.	.	.
Template Conservation
Template Sequence		L	E	E	T	L	K	K	A	S	P	D	G	Y	D	C	Y	F	D	N	V	G	G	E	F	S	N	T	V	I	G	Q	M	K	K	F	G	R	I	A	I	C	G	A	I	S	T	Y	N	R	T	G	P	L	P	P	G	P	P	P	E	I	V	I	Y	Q	E	L	R	M	E	A	F	V	V	Y	R	W	Q	G	D
Template Known Secondary structure											T	T								S	S										T	T													G	G	G	T	T			S	S													T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
				305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.
Predicted Secondary structure		.	.																																												.
Query SS confidence		.	.																																												.
Query Sequence		.	.	S	T	S	W	R	N	A	I	R	L	L	A	S	G	A	I	K	V	K	P	M	I	T	H	R	I	G	L	S	Q	W	R	E	G	F	D	A	M	V	D	K	T	A	.	I	K	V	I	M	T
Query Conservation		.	.																																												.
Alig confidence		.	.																				.	.																							.
Template Conservation																							.	.
Template Sequence		A	R	Q	K	A	L	K	D	L	L	K	W	V	L	E	G	K	I	Q	Y	K	.	.	E	Y	I	I	E	G	F	E	N	M	P	A	A	F	M	G	M	L	K	G	D	N	L	G	K	T	I	V	K
Template Known Secondary structure																T	T	S	S				.	.							G	G	G										T	T			S	S
Template Predicted Secondary structure																							.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions