Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 21 Aligned Residues 336 % Identity 19% Template c1yqxB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:sinapyl alcohol dehydrogenase; PDBTitle: sinapyl alcohol dehydrogenase at 2.5 angstrom resolution Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	A	L	A	R	F	G	K	A	F	G	G	Y	K	M	I	D	V	P	Q	P	M	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	D	E	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K	D	W	K	V	G
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		A	F	G	W	A	A	R	D	Q	S	.	G	H	L	S	P	F	N	F	S	R	R	A	T	G	E	E	D	V	R	F	K	V	L	Y	C	G	V	C	H	S	D	L	H	S	I	K	N	D	W	G	F	S	M	Y	P	L	V	P	G	H	E	I	V	G	E	V	T	E	V	G	S	K	V	K	K	V	N	V	G
Template Known Secondary structure									S	T	T	.															T	T																					T	T	T	S				S	S	B															T	T			S			T	T
Template Predicted Secondary structure												.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120					.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		Q	R	V	V	S	D	N	S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	.	.	.	.	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A	V	L
Query Conservation																																										.	.	.	.
Alig confidence																																										.	.	.	.																						.	.	.	.	.	.
Template Conservation																																																																			.	.	.	.	.	.
Template Sequence		D	K	V	G	V	G	C	L	V	G	A	C	H	S	C	E	S	C	A	N	D	L	E	N	Y	C	P	K	M	I	L	T	Y	A	S	I	Y	H	D	G	T	I	T	Y	G	G	Y	S	N	H	M	V	A	N	E	R	Y	I	I	R	F	P	D	N	M	.	.	.	.	.	.	P	L	D	G	G	A	P	L	L
Template Known Secondary structure								S						S	S	S					T	T		G	G	G		T	T				S	S	S	S	B		T	T	S		B				S	S	B	S						G	G	G						T	T	S	.	.	.	.	.	.						G	G	G	G
Template Predicted Secondary structure																																																																			.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	I	C	N	A	Y	K	S	I	A	Q	Q	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V	V	A
Query Conservation
Alig confidence																																																										.	.	.
Template Conservation																																																										.	.	.
Template Sequence		C	A	G	I	T	V	Y	S	P	L	K	Y	F	G	L	D	E	P	G	K	H	I	G	I	V	G	L	G	G	L	G	H	V	A	V	K	F	A	K	A	F	G	S	K	V	T	V	I	S	T	S	P	S	K	K	E	.	.	.	E	A	L	K	N	F	G	A	D	S	F	L	V	S	R	D	Q	E	Q	M	Q
Template Known Secondary structure		T												T	T			S	T	T									S														T								S		G	G	G			.	.	.					T	T			S					T	T
Template Predicted Secondary structure																																																										.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	Q	Q	I	C	G	K	D	N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	M	G	F	K	P	L	D	F	S	I	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D	S	T	S	W	R	N	A	I	R	L	L	A
Query Conservation
Alig confidence					.	.	.	.	.
Template Conservation					.	.	.	.	.
Template Sequence		A	A	A	.	.	.	.	.	G	T	L	D	G	I	I	D	T	V	S	A	V	H	P	L	L	P	L	F	G	L	L	K	S	H	G	K	L	I	L	V	G	A	P	E	K	P	L	E	L	P	A	F	S	L	I	A	G	R	K	I	V	A	G	S	G	I	G	G	M	K	E	T	Q	E	M	I	D	F	A	A
Template Known Secondary structure			T	T	.	.	.	.	.	T										S	S				S																				S	S											T	T	T								S
Template Predicted Secondary structure					.	.	.	.	.
Template SS confidence
		243	.	.						.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		S	G	A	I	K	V	K	P	M	I	T	H	R	I	G	L	S	Q	W	R	E	G	F	D	A	M	V	D	K	T	A	.	I	K	V	I	M	T	Y
Query Conservation																																	.
Alig confidence								.	.	.																							.
Template Conservation								.	.	.
Template Sequence		K	H	N	I	T	A	.	.	.	D	I	E	V	I	S	T	D	Y	L	N	T	A	M	E	R	L	A	K	N	D	V	R	Y	R	F	V	I	D	V
Template Known Secondary structure			T	T				.	.	.							G	G	G										T	T		S	S	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		318	.	320	.	.	.				.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions