Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 2 Aligned Residues 343 % Identity 23% Template c1pl6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:sorbitol dehydrogenase; PDBTitle: human sdh/nadh/inhibitor complex Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.
Query SS confidence																																																						.	.	.
Query Sequence		M	K	A	L	A	R	F	G	K	A	F	G	G	Y	K	M	I	D	V	P	Q	P	M	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	.	.	.	D	E	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K	D	W
Query Conservation																																																						.	.	.
Alig confidence												.	.																																									.	.	.
Template Conservation												.	.
Template Sequence		N	L	S	L	V	V	H	G	P	G	.	.	D	L	R	L	E	N	Y	P	I	P	E	P	G	P	N	E	V	L	L	R	X	H	S	V	G	I	C	G	S	D	V	H	Y	W	E	Y	G	R	I	G	N	F	I	V	K	K	P	X	V	L	G	H	E	A	S	G	T	V	E	K	V	G	S	S	V	K	H	L
Template Known Secondary structure										T	T	.	.														T	T																						S			T	T					S																	T	T			S
Template Predicted Secondary structure												.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	G	Q	R	V	V	S	D	N	S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A	V	L	D
Query Conservation
Alig confidence														.																												.	.																		.	.	.	.	.	.	.
Template Conservation														.																												.	.																		.	.	.	.	.	.	.
Template Sequence		K	P	G	D	R	V	A	I	E	P	G	A	.	P	R	E	N	D	E	F	C	K	X	G	R	Y	N	L	S	P	S	I	F	F	C	A	T	P	P	D	.	.	D	G	N	L	C	R	F	Y	K	H	N	A	A	F	C	Y	K	.	.	.	.	.	.	.	L	P	D	N	V	T	F	E	E	G	A	L	I	E
Template Known Secondary structure			T	T							S			.		S	S							T	T		G	G	G		T	T				T	T	S	T	T	S	.	.					B	S						G	G	G				.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure														.																												.	.																		.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	I	C	N	A	Y	K	S	I	A	Q	Q	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V	V	A	R
Query Conservation
Alig confidence																											.																																				.
Template Conservation																											.																																				.
Template Sequence		P	L	S	V	G	I	H	A	C	R	R	G	G	V	T	L	G	H	K	V	L	V	C	G	A	.	G	P	I	G	X	V	T	L	L	V	A	K	A	X	G	A	A	Q	V	V	V	T	D	L	S	A	T	R	L	S	K	A	K	E	I	.	G	A	D	L	V	L	Q	I	S	K	E	S	P	Q	E	I	A	R
Template Known Secondary structure														T			T	T									.	S													T	T		S							S											T	.	T		S						S	S
Template Predicted Secondary structure																											.																																				.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Q	Q	I	C	G	K	D	N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	M	G	F	K	P	L	D	F	S	I	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D	S	T	S	W	R	N	A	I	R	L	L	A	S
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		K	V	E	G	Q	L	G	C	K	P	E	V	T	I	E	C	T	G	A	E	A	S	I	Q	A	G	I	Y	A	T	R	S	G	G	T	L	V	L	V	G	L	G	S	E	X	T	T	V	P	L	L	H	A	A	I	R	E	V	D	I	K	G	V	F	R	Y	C	N	.	T	W	P	V	A	I	S	X	L	A	S
Template Known Secondary structure								T	S			S						S													S		T	T							S				S	S										T	T	T								S		S	S	.											T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.		.	.	.	.	.	.	.	.	310	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	I	K	V	K	P	M	I	T	H	R	I	G	L	S	Q	W	R	E	G	F	D	A	M	V	D	K	T	A	I	K	V	I	M	T	Y	D	F	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	V	N	V	K	P	L	V	T	H	R	F	P	L	E	K	A	L	E	A	F	E	T	F	K	K	G	L	G	L	K	I	X	L	K	C	D	P	S	D
Template Known Secondary structure		T	S				G	G	G							G	G	G										T	T		S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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