Job Description P77539 Confidence 100.00% Date Thu Jan 5 12:30:22 GMT 2012 Rank 44 Aligned Residues 311 % Identity 14% Template c1o89A_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:yhdh; PDBTitle: crystal structure of e. coli k-12 yhdh Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		M	K	A	L	A	R	F	G	K	A	F	G	G	Y	K	M	I	D	V	P	Q	P	M	C	G	P	E	D	V	V	I	E	I	K	A	A	A	I	C	G	A	D	M	K	H	Y	N	V	D	S	G	S	D	E	.	F	N	S	I	R	G	H	E	F	A	G	C	I	A	Q	V	G	E	K	V	K	D	W	K	V
Query Conservation																																																								.
Alig confidence												.	.																																											.																.	.
Template Conservation												.	.																																																											.	.
Template Sequence		L	Q	A	L	L	L	E	Q	Q	T	.	.	L	A	S	V	Q	T	L	D	E	S	R	L	P	E	G	D	V	T	V	D	V	H	W	S	S	L	N	Y	K	D	A	L	A	I	T	G	K	G	K	I	I	R	N	F	P	M	I	P	G	I	D	F	A	G	T	V	R	T	.	.	S	E	D	P	R	F	H	A
Template Known Secondary structure												.	.									G	G	G	S		S		S																				T		S	S				S	S	S	B				S									.	.			S	T	T			T
Template Predicted Secondary structure												.	.																																																											.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10			.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.			.	70	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	R	V	V	S	D	N	S	G	H	V	C	G	V	C	P	A	C	E	Q	G	D	F	L	C	C	T	E	K	V	N	L	G	L	D	N	N	T	W	G	G	G	F	S	K	Y	C	L	V	P	G	E	I	L	K	I	H	R	H	A	L	W	E	I	P	D	G	V	D	Y	E	D	A	A	V	L	D	P	I
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template Sequence		G	Q	E	V	L	L	T	G	W	G	V	G	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	W	G	G	L	A	E	Q	A	R	V	K	G	D	W	L	V	A	M	P	Q	G	L	.	.	.	D	A	R	K	A	M	I	I	G	T	A	G	F	T	A
Template Known Secondary structure		T								T	T	B	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B			S	S	B	S						G	G	G						T	T		.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.																										.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.				.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	N	A	Y	K	S	I	A	Q	Q	S	K	F	L	P	G	Q	D	V	V	V	I	G	T	G	P	L	G	L	F	S	V	Q	M	A	R	I	M	G	A	V	N	I	V	V	V	G	L	Q	E	D	V	A	V	R	F	P	V	A	K	E	L	G	A	T	A	V	V	N	G	S	T	E	D	V	V	A	R	C	Q
Query Conservation
Alig confidence																																																																												.	.	.	.	.	.
Template Conservation																																																																												.	.	.	.	.	.
Template Sequence		M	L	C	V	M	A	L	E	D	A	G	V	R	P	Q	D	G	E	I	V	V	T	G	A	S	G	G	V	G	S	T	A	V	A	L	L	H	K	L	G	Y	Q	V	V	A	V	S	G	R	E	S	T	H	E	Y	L	K	S	L	G	A	S	R	V	L	P	R	D	E	F	A	E	S	R	.	.	.	.	.	.
Template Known Secondary structure											T	T			G	G	G						S	S	T	T	S													T	T								S		G	G	G								T							G	G	G	S	S	S			.	.	.	.	.	.
Template Predicted Secondary structure																																																																												.	.	.	.	.	.
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.
Predicted Secondary structure																																								.																												.	.	.	.	.	.
Query SS confidence																																								.																												.	.	.	.	.	.
Query Sequence		Q	I	C	G	K	D	N	L	G	L	V	I	E	C	S	G	A	N	I	A	L	K	Q	A	I	E	M	L	R	P	N	G	E	V	V	R	V	G	.	M	G	F	K	P	L	D	F	S	I	N	D	I	T	A	W	N	K	S	I	I	G	H	M	A	Y	D	.	.	.	.	.	.	S	T	S	W	R	N	A	I
Query Conservation																																								.																												.	.	.	.	.	.
Alig confidence		.	.																																					.																												.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	P	L	E	K	Q	V	W	A	G	A	I	D	T	V	G	D	K	V	L	A	K	V	L	A	Q	M	N	Y	G	G	C	V	A	A	C	G	L	A	G	G	F	T	L	P	T	T	V	M	P	F	I	L	R	N	V	R	L	Q	G	V	D	S	V	M	T	P	P	E	R	R	A	Q	A	W	Q	R	L	V
Template Known Secondary structure		.	.	S	S											S	S											T													T	T		S						S															S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		R	L	L	A	S	G	A	I	K	V	K	P	M	I	T	H	R	I	G	L	S	Q	W	R	E	G	F	D	A	M	V	D	K	T	A	.	I	K	V	I	M	T	Y
Query Conservation																																					.
Alig confidence												.	.	.																							.
Template Conservation												.	.	.
Template Sequence		A	D	L	P	E	S	F	Y	T	Q	.	.	.	A	A	K	E	I	S	L	S	E	A	P	N	F	A	E	A	I	I	N	N	Q	I	Q	G	R	T	L	V	K	V
Template Known Secondary structure				S						S	S	.	.	.							G	G	G										T	T				S
Template Predicted Secondary structure												.	.	.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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