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Job DescriptionP77539
Confidence100.00%DateThu Jan 5 12:30:22 GMT 2012
Rank31Aligned Residues334
% Identity27%Templatec1lluD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:alcohol dehydrogenase; PDBTitle: the ternary complex of pseudomonas aeruginosa alcohol2 dehydrogenase with its coenzyme and weak substrate
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSG. SDEFNSIRGHEFAGCIAQVGEKVKDWKV
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Template Sequence  MKAAVVHAYG. APLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKE
Template Known Secondary structure 
BB
BTT.B








TT


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SSB


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   80.........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  GQRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTWGGGFSKYCLVPGEILKIHRHALWEIPDGVDYEDAAVLDPI
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Template Sequence  GDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYS. . . VNGGYAEYVLADPNYVGI. . . . . . . LPKNVEFAEIAPILCA
Template Known Secondary structure  T

S

SSSTTTTTT
GGG
TT
BTTT...B

SSBS
TTTS.......

TTS
GGGGT
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   86...90.........100.........110.........120. ........130......... 140.........150.....
 
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Query Sequence  CNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELGATAVVNGSTEDVVARCQ
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Template Sequence  GVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDI. . . . DDAKLELARKLGASLTVNARQEDPVEAIQ
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TTS

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   156...160.........170.........180.........190.........200.. .......210.........220.........230.
 
   240.........250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  QICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMAYDSTSWRNAIRLLASGA
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Template Sequence  RDI. . GGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGL
Template Known Secondary structure  T..SS



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   232.. .....240.........250.........260.........270.........280.........290.........300.........
 
   320.........330.........340....... ..350....
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Query Sequence  IKVKPMITHRIGLSQWREGFDAMVDKTA. IKVIMTY
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Template Sequence  VKA. . . TIHPGKLDDINQILDQMRAGQIEGRIVLEM
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GGGTT

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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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