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Job DescriptionP77539
Confidence100.00%DateThu Jan 5 12:30:22 GMT 2012
Rank9Aligned Residues345
% Identity18%Templatec1cdoB_
PDB info PDB header:oxidoreductase (ch-oh(d)-nad(a))Chain: B: PDB Molecule:alcohol dehydrogenase; PDBTitle: alcohol dehydrogenase (e.c.1.1.1.1) (ee isozyme) complexed with2 nicotinamide adenine dinucleotide (nad), and zinc
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MKALARFGKAFGGYKMIDVPQPMCGPEDVVIEIKAAAICGADMKHYNVDSGSDEFNSIRGHEFAGCIAQVGEKVKDWKVG
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Template Sequence  CKAAVAWEAN. KPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPG
Template Known Secondary structure  B
STT.S





TT




GGG
S




TT

S

TT
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   910........ .20.........30.........40.........50.........60.........70.........80.......
 
   81........90.........100.........110......... 120.........130.........140..
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Query Sequence  QRVVSDNSGHVCGVCPACEQGDFLCCTEKVNLGLDNNTW. . . . . . . . . . . . . . . . . . GGGFSKYCLVPGEILKIHRHALW
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Template Sequence  EKVIPL. FISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSA.
Template Known Secondary structure 

.SS


SSSTTTT
TT



S
S
TTTTS
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TT
GGGT

SBSGGG

TT
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   88.90... ......100.........110.........120.........130.........140.........150.........160.....
 
   143......150.........160.........170.........180.........190.........200.........210.........220..
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Query Sequence  EIPDGVDYEDAAVLDPICNAYKSIAQQSKFLPGQDVVVIGTGPLGLFSVQMARIMGAVNIVVVGLQEDVAVRFPVAKELG
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Template Sequence  . . . . . PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVF. GAT
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GGGGTTTT


TT


ST
S
S
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   166...170.........180.........190.........200.........210.........220.........230...... ...
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  ATAVVNGSTEDVVARCQQICGKDNLGLVIECSGANIALKQAIEMLRPNGEVVRVGMGFKPLDFSINDITAWNKSIIGHMA
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Template Sequence  DFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMF
Template Known Secondary structure 
GGG
SS
TS
BS
S

TB
TTT

S


SS




TT

SG
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   240.........250.........260.........270.........280.........290.........300.........310.........
 
   303. .....310.........320.........330.........340.........350....
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Query Sequence  YD. . . STSWRNAIRLLASGAIKVKPMITHRIGLSQWREGFDAMVDKTAIKVIMTY
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Template Sequence  GGFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL
Template Known Secondary structure  GG

TTSS

GGGGGGTT

S
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   320.........330.........340.........350.........360.........370....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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