Email l.a.kelley@imperial.ac.uk Description P33920 Date Thu Jan 5 11:52:46 GMT 2012 Unique Job ID b45d6039f491b205

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d2bsqe1 63.6 9 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Trafficking protein A-like 2 d1mula_ 46.0 21 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 3 d1huua_ 36.5 16 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 4 c3c4iA_ 34.9 12 PDB header:dna binding protein Chain: A: PDB Molecule:dna-binding protein hu homolog; PDBTitle: crystal structure analysis of n terminal region containing the2 dimerization domain and dna binding domain of hu protein(histone like3 protein-dna binding) from mycobacterium tuberculosis [h37rv] 5 d1p71a_ 34.3 19 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 6 d1owfa_ 33.9 14 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 7 c2iifA_ 33.2 16 PDB header:recombination/dna Chain: A: PDB Molecule:integration host factor; PDBTitle: single chain integration host factor mutant protein (scihf2-2 k45ae) in complex with dna 8 d1exea_ 28.9 9 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 9 d1b8za_ 28.3 18 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 10 c2k42A_ 19.4 29 PDB header:signaling protein Chain: A: PDB Molecule:wiskott-aldrich syndrome protein; PDBTitle: solution structure of the gtpase binding domain of wasp in2 complex with espfu, an ehec effector 11 c2kl8A_ 19.0 19 PDB header:de novo protein Chain: A: PDB Molecule:or15; PDBTitle: solution nmr structure of de novo designed ferredoxin-like2 fold protein, northeast structural genomics consortium3 target or15 12 c3gr5A_ 18.5 7 PDB header:membrane protein Chain: A: PDB Molecule:escc; PDBTitle: periplasmic domain of the outer membrane secretin escc from2 enteropathogenic e.coli (epec) 13 c2y9kG_ 18.2 18 PDB header:protein transport Chain: G: PDB Molecule:protein invg; PDBTitle: three-dimensional model of salmonella's needle complex at2 subnanometer resolution 14 d1owfb_ 17.5 9 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 15 d1mnta_ 16.4 24 Fold:Ribbon-helix-helix Superfamily:Ribbon-helix-helix Family:Arc/Mnt-like phage repressors 16 c1f3mB_ 16.2 30 PDB header:transferase Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: crystal structure of human serine/threonine kinase pak1 17 c2xflB_ 16.1 26 PDB header:hydrolase Chain: B: PDB Molecule:dyne7; PDBTitle: induced-fit and allosteric effects upon polyene binding2 revealed by crystal structures of the dynemicin3 thioesterase 18 c1ceeB_ 15.0 29 PDB header:structural protein regulation Chain: B: PDB Molecule:wiskott-aldrich syndrome protein wasp; PDBTitle: solution structure of cdc42 in complex with the gtpase2 binding domain of wasp 19 c2y3mA_ 14.6 17 PDB header:transport protein Chain: A: PDB Molecule:protein transport protein hofq; PDBTitle: structure of the extra-membranous domain of the secretin2 hofq from actinobacillus actinomycetemcomitans 20 d1ej5a_ 14.5 32 Fold:Wiscott-Aldrich syndrome protein, WASP, C-terminal domain Superfamily:Wiscott-Aldrich syndrome protein, WASP, C-terminal domain Family:Wiscott-Aldrich syndrome protein, WASP, C-terminal domain 21 c3fwcO_ not modelled 14.3 7 PDB header:cell cycle, transcription Chain: O: PDB Molecule:protein sus1; PDBTitle: sac3:sus1:cdc31 complex 22 d1ucra_ not modelled 13.2 26 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Dissimilatory sulfite reductase DsvD 23 c1u9pA_ not modelled 12.3 12 PDB header:unknown function Chain: A: PDB Molecule:parc; PDBTitle: permuted single-chain arc 24 d2o97b1 not modelled 11.1 25 Fold:IHF-like DNA-binding proteins Superfamily:IHF-like DNA-binding proteins Family:Prokaryotic DNA-bending protein 25 c3eudE_ not modelled 9.5 23 PDB header:nuclear protein Chain: E: PDB Molecule:protein shq1; PDBTitle: structure of the cs domain of the essential h/aca rnp2 assembly protein shq1p 26 d1d5ya1 not modelled 8.4 7 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:AraC type transcriptional activator 27 c2ptvA_ not modelled 8.1 12 PDB header:immune system Chain: A: PDB Molecule:cd48 antigen; PDBTitle: structure of nk cell receptor ligand cd48 28 c3ossD_ not modelled 7.8 7 PDB header:protein transport Chain: D: PDB Molecule:type 2 secretion system, secretin gspd; PDBTitle: the crystal structure of enterotoxigenic escherichia coli gspc-gspd2 complex from the type ii secretion system 29 d2o4ta1 not modelled 7.8 14 Fold:Left-handed superhelix Superfamily:BH3980-like Family:BH3980-like 30 d1d6za4 not modelled 7.4 20 Fold:N domain of copper amine oxidase-like Superfamily:Copper amine oxidase, domain N Family:Copper amine oxidase, domain N 31 d1d8ja_ not modelled 6.6 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:The central core domain of TFIIE beta 32 d2qi2a1 not modelled 6.6 31 Fold:Sm-like fold Superfamily:Dom34/Pelota N-terminal domain-like Family:Dom34/Pelota N-terminal domain-like 33 d2b0ga1 not modelled 6.6 13 Fold:Ferredoxin-like Superfamily:RNA-binding domain, RBD Family:Canonical RBD 34 c3kf8D_ not modelled 6.4 25 PDB header:structural protein Chain: D: PDB Molecule:protein ten1; PDBTitle: crystal structure of c. tropicalis stn1-ten1 complex 35 c2edoA_ not modelled 6.0 26 PDB header:cell adhesion Chain: A: PDB Molecule:cd48 antigen; PDBTitle: solution structure of the first ig-like domain from human2 cd48 antigen 36 c1e0aB_ not modelled 5.8 24 PDB header:signalling protein Chain: B: PDB Molecule:serine/threonine-protein kinase pak-alpha; PDBTitle: cdc42 complexed with the gtpase binding domain of p212 activated kinase 37 c2np2B_ not modelled 5.6 21 PDB header:dna binding protein/dna Chain: B: PDB Molecule:hbb; PDBTitle: hbb-dna complex 38 d1rxta1 not modelled 5.6 31 Fold:Acyl-CoA N-acyltransferases (Nat) Superfamily:Acyl-CoA N-acyltransferases (Nat) Family:N-myristoyl transferase, NMT 39 c3aqjQ_ not modelled 5.6 38 PDB header:metal binding protein Chain: Q: PDB Molecule:baseplate assembly protein v; PDBTitle: crystal structure of a c-terminal domain of the bacteriophage p2 tail2 spike protein, gpv 40 d1qa9b_ not modelled 5.3 26 Fold:Immunoglobulin-like beta-sandwich Superfamily:Immunoglobulin Family:V set domains (antibody variable domain-like) 41 c2o37A_ not modelled 5.1 18 PDB header:chaperone Chain: A: PDB Molecule:protein sis1; PDBTitle: j-domain of sis1 protein, hsp40 co-chaperone from2 saccharomyces cerevisiae.