Job Description P04993 Confidence 98.20% Date Thu Jan 5 10:58:32 GMT 2012 Rank 102 Aligned Residues 105 % Identity 19% Template c3u5zM_ PDB info PDB header:dna binding protein/dna Chain: M: PDB Molecule:dna polymerase accessory protein 44; PDBTitle: structure of t4 bacteriophage clamp loader bound to the t4 clamp,2 primer-template dna, and atp analog Resolution 3.50 Å

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		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	V	A	A	A	V	A	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P
Query Conservation
Alig confidence																																				.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	S	I	T	S	K	G	K	I	P	H	I	I	L	H	S	P	S	P	G	T	G	K	T	T	V	A	K	A	L	C	H	D	V	.	.	.	.	.	.	.	N	A	D	M	M	F	V	N	G	S	D	C	K	I	D	F	V	R	G	P	L	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								S	S									S	S	S		S	S												T	.	.	.	.	.	.	.	T								G	G	G								T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																				.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.								.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.					.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	.	.	.	.	P	D	H	A	R	V	I	F	L	G	D	R	D	Q
Query Conservation																																																						.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	A	S	A	A	S	F	D	G	R	Q	K	V	I	V	I	D	E	F	D	R	S	G	L	A	E	S	Q	R	H	L	R	S	F	M	E	A	Y	S	S	N	C	S	I	I	I	T	A	N	N	I	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S			T	T										S				G	G	G														T	T	T	T								S		G	G
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions