Job Description P04993 Confidence 98.37% Date Thu Jan 5 10:58:32 GMT 2012 Rank 78 Aligned Residues 98 % Identity 26% Template c3pfiB_ PDB info
PDB header: hydrolaseChain: B: PDB Molecule: holliday junction atp-dependent dna helicase ruvb;
PDBTitle: 2.7 angstrom resolution crystal structure of a probable holliday2 junction dna helicase (ruvb) from campylobacter jejuni subsp. jejuni3 nctc 11168 in complex with adenosine-5'-diphosphate
Resolution 2.69 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
152 . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . .
Predicted Secondary structure
. . . . . . . .
Query SS confidence
.
.
.
.
.
.
.
.
Query Sequence
N W Q K V A A A V A L T R R I .
.
.
.
.
.
.
.
S V I S G G P G T G K T T T V A K L L A A L I Q M A D G E R C R I R L A A P T G K A A A R L T E S L G K A L R Q L
Query Conservation
. . . . . . . .
Alig confidence
. . . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . .
Template Sequence
E S I K K N L N V F I A A A K K R N E C L D H I L F S G P A G L G K T T L A N I I S Y E .
.
.
.
.
.
X S A N I K T T A A P X I E K S G D L A A I L T .
.
.
.
.
.
Template Known Secondary structure
T T S S T T S S . . . . . . T T G G G S S . . . . . .
Template Predicted Secondary structure
. . . . . . . . . . . .
Template SS confidence
32 . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . .
224 . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
P L T D E Q K K R I P E D A S T L H R L L G A Q P G S Q R L R H H A G N P L H L D V L V V D E A S M I D L P M M S R L I D A L P D H A R V I F L G
Query Conservation
Alig confidence
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Sequence
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
N L S E G D I L F I D E I H R L S P A I E E V L Y P A X E D Y P K F T L I G
Template Known Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T T S G G G T
Template Predicted Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template SS confidence
100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
