Job Description P04993 Confidence 98.08% Date Thu Jan 5 10:58:32 GMT 2012 Rank 117 Aligned Residues 165 % Identity 12% Template c3mwyW_ PDB info PDB header:hydrolase Chain: W: PDB Molecule:chromo domain-containing protein 1; PDBTitle: crystal structure of the chromodomain-atpase portion of the yeast chd12 chromatin remodeler Resolution 3.70 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		V	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	.	.	.	.	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																																		.									.
Template Conservation																																																								.									.
Template Sequence		G	G	E	L	R	D	F	Q	L	T	G	I	N	W	M	A	F	L	W	S	K	G	D	N	G	I	L	A	D	E	M	G	L	G	K	T	V	Q	T	V	A	F	I	S	W	L	I	F	A	R	R	Q	N	G	.	P	H	I	I	V	V	P	L	.	S	T	M	P	A	W	L	D	T	F	E	K	W	A	P	D
Template Known Secondary structure		S	S				T														T	T	T									T	T	S	S	T	T															S			S	.								T	.	T	T												S	T	T
Template Predicted Secondary structure																																																								.									.
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.		.	.	.	430	.	.	.	.		.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.												.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.																							.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.																							.	.
Query Sequence		L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	.	.	.	.	.	.	.	.	.	.	.	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	.	.	D	L	P	M	M	S	R	L	I	D	A	L	P	D	H
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.																							.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																							.	.
Template Conservation
Template Sequence		L	N	C	I	C	Y	M	G	N	Q	K	S	R	D	T	I	R	E	Y	E	F	Y	T	N	P	K	T	M	K	F	N	V	L	L	T	T	Y	E	Y	I	L	K	D	R	A	E	L	G	S	I	K	W	Q	F	M	A	V	D	E	A	H	R	L	K	N	A	E	S	S	L	Y	E	S	L	N	S	F	K	V	A
Template Known Secondary structure										S	S											S		S								S						T	T					T						T	S								T	T	G	G	G	G			S	S	S							T	T	S
Template Predicted Secondary structure
Template SS confidence
		451	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	V	I	F	L	G	D	R	D	Q	L	A	S	V	E	A	G	A	V	L	G	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	M	L	I	T	G	T	P	L	Q	N	N	I	K	E	L	A	A	L	V	N	F	L
Template Known Secondary structure								S				S	S		S
Template Predicted Secondary structure
Template SS confidence
		536	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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