Return to main results Retrieve Phyre Job Id

Job DescriptionP04993
Confidence97.67%DateThu Jan 5 10:58:32 GMT 2012
Rank176Aligned Residues40
% Identity15%Templatec3bosA_
PDB info PDB header:hydrolase regulator,dna binding proteinChain: A: PDB Molecule:putative dna replication factor; PDBTitle: crystal structure of a putative dna replication regulator hda2 (sama_1916) from shewanella amazonensis sb2b at 1.75 a resolution
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   151........160...... ...170.........180.........190
Predicted Secondary structure 



...





Query SS confidence 















. . .























Query Sequence  INWQKVAAAVALTRRI. . . SVISGGPGTGKTTTVAKLLAALIQ
Query Conservation     
  

        ... 

 
 






 
   
  
  
Alig confidence 















...























Template Conservation         
           


 







 

  

     
Template Sequence  NDELIGALKSAASGDGVQAIYLWGPVKSGRTHLIHAACARANE
Template Known Secondary structure 
T
S
S
STTSS
Template Predicted Secondary structure 













Template SS confidence 










































   35....40.........50.........60.........70.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions