Job Description P04993 Confidence 98.79% Date Thu Jan 5 10:58:32 GMT 2012 Rank 34 Aligned Residues 149 % Identity 16% Template c2zj2A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative ski2-type helicase; PDBTitle: archaeal dna helicase hjm apo state in form 1 Resolution 2.40 Å

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		137	.	.	140	.	.	.	.	.	.				.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure												.	.	.																.																					.
Query SS confidence												.	.	.																.																					.
Query Sequence		L	A	Q	T	L	D	K	L	F	P	.	.	.	V	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	.	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	.	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R
Query Conservation												.	.	.																.																					.
Alig confidence												.	.	.																.																					.											.	.	.	.
Template Conservation																																																														.	.	.	.
Template Sequence		V	D	E	R	I	K	S	T	L	K	E	R	G	I	E	S	F	Y	P	P	Q	A	E	A	L	K	S	G	I	L	E	G	K	N	A	L	I	S	I	P	T	A	S	G	K	T	L	I	A	E	I	A	M	V	H	R	I	L	T	Q	.	.	.	.	G	G	K	A	V	Y	I	V	P	L	K	A	L	A	E	E
Template Known Secondary structure		S											T	T			B										T	T	T	G	G	G	T							S		G	G	G	T																	.	.	.	.		S							S	S	T	T	S
Template Predicted Secondary structure																																																														.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		212	.	.	.	.	.	.	.	220	.	.											.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Query Sequence		L	T	E	S	L	G	K	A	L	R	Q	.	.	.	.	.	.	.	.	.	.	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	.	.	.	.	D	L	P
Query Conservation													.	.	.	.	.	.	.	.	.	.																																																					.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.																									.	.	.	.
Template Conservation																																													.	.	.	.	.	.
Template Sequence		K	F	Q	E	F	Q	D	W	E	K	I	G	L	R	V	A	M	A	T	G	D	Y	D	S	K	D	E	W	L	G	K	Y	D	I	I	I	A	T	A	E	K	F	D	.	.	.	.	.	.	S	L	L	R	H	G	S	S	W	I	K	D	V	K	I	L	V	A	D	E	I	H	L	I	G	S	R	D	R	G	A
Template Known Secondary structure						T	G	G	G	G	G	G	T								S			S				G	G	G	G	G		S											.	.	.	.	.	.						T		G	G	G	G	G								T	G	G	G	G	G		T	T	T
Template Predicted Secondary structure																																													.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.							.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	M	S	R	L	I	D	A	L	P	D	H	A	R	V	I	F	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	L	E	V	I	L	A	H	M	L	G	K	A	Q	I	I	G	L
Template Known Secondary structure											B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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