Job Description P04993 Confidence 98.15% Date Thu Jan 5 10:58:32 GMT 2012 Rank 109 Aligned Residues 81 % Identity 17% Template c2z0mA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:337aa long hypothetical atp-dependent rna PDBTitle: crystal structure of hypothetical atp-dependent rna2 helicase from sulfolobus tokodaii Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		138	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		A	Q	T	L	D	K	L	F	P	V	S	.	.	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S
Query Conservation													.	.
Alig confidence													.	.																															.	.											.	.	.	.	.
Template Conservation																																													.	.											.	.	.	.	.
Template Sequence		E	K	I	E	Q	A	I	R	E	M	G	F	K	N	F	T	E	V	Q	S	K	T	I	P	L	M	L	Q	G	K	N	V	V	V	R	A	K	T	G	S	G	K	T	.	.	A	A	Y	A	I	P	I	L	E	L	.	.	.	.	.	G	M	K	S	L	V	V	T	P	T	R	E	L	T	R	Q	V	A	S	H
Template Known Secondary structure											T	T			S														T	T									T	T	S	S			.	.											.	.	.	.	.	T								S	S
Template Predicted Secondary structure																																													.	.											.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		216	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	K	A	L	R	Q	L	P	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	R	D	I	G	R	Y	M	D	T
Template Known Secondary structure						T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions