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Job DescriptionP04993
Confidence97.64%DateThu Jan 5 10:58:32 GMT 2012
Rank182Aligned Residues141
% Identity16%Templatec2w00B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hsdr; PDBTitle: crystal structure of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160... ......170.........180.........190.........200.........210.......
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Query Sequence  NWQKVAAAVALT. . . . . . . . . . . . . . RRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLG
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Template Sequence  PYQIAATERILWKIKSSFTAKNWSKPESGGYIWHTTGSGKTLTSFKAARLATELDFID. . KVFFVVDRKDLDYQTXKEYQ
Template Known Secondary structure  TT

SSGGGS
TTSSTT
TT

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GGG

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   274.....280.........290.........300.........310.........320.........330. ........340.........350.
 
   218.220.........230. ........240.........250.........260.........270....... ..280.......
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Query Sequence  KALRQLPLTDEQKK. . . . . . . . . RIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLP. MMSRLIDALP
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Template Sequence  RFSPDSVNGSENTAGLKRNLDKDDNKIIVTTIQKLN. . . . NLXKAESDLPVYNQQVVFIFDECHRSQFGEAQKNLKKKFK
Template Known Secondary structure  TTSTT
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GGGGSS

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   352.......360.........370.........380....... ..390.........400.........410.........420.......
 
   288.290........
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Query Sequence  DHARVIFLGDR
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Template Sequence  RYYQFGFTGTP
Template Known Secondary structure  SS
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   428.430........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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