Return to main results Retrieve Phyre Job Id

Job DescriptionP04993
Confidence94.49%DateThu Jan 5 10:58:32 GMT 2012
Rank471Aligned Residues49
% Identity18%Templatec2vsfA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dna repair helicase rad3 related protein; PDBTitle: structure of xpd from thermoplasma acidophilum
Resolution2.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   167..170.........180.........190.........200.........210........
Predicted Secondary structure 














Query SS confidence 



















































Query Sequence  SVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGK
Query Conservation   

 
 






 
   
  
          


 


 


  
   
  
Alig confidence 














...

































Template Conservation 
 









 
 ...
  

        



 
 
  

 
   

  
Template Sequence  VALESPTGSGKTIMA. . . LKSALQYSSERKLKVLYLVRTNSQEEQVIKELRS
Template Known Secondary structure 


SSSSTT...TT
SSTTTTS
SS
Template Predicted Secondary structure 





...






Template SS confidence 



















































   25....30......... 40.........50.........60.........70...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions