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Job DescriptionP04993
Confidence97.84%DateThu Jan 5 10:58:32 GMT 2012
Rank152Aligned Residues147
% Identity12%Templatec2v1uA_
PDB info PDB header:replicationChain: A: PDB Molecule:cell division control protein 6 homolog; PDBTitle: structure of the aeropyrum pernix orc1 protein in complex2 with dna
Resolution3.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160.... .....170.........180.........190.........200.........210.........220....
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Query Sequence  NWQKVAAAVALTR. . . . . . . RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLP
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Template Sequence  EAELRRLAEVLAPALRGEKPSNALLYGLTGTGKTAVARLVLRRLEARASSLGVLVKPIYVNARHRETPYRVASAIAEAVG
Template Known Secondary structure  TTGGGTSS





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   37..40.........50.........60.........70.........80.........90.........100.........110......
 
   225....230.........240.........250.........260.........270..... ....280.........290.........
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Query Sequence  LTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMID. . . . . LPMMSRLIDALPDHARVIFLGDRD
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Template Sequence  VRVPFTGLSVGEVYERLVKRLSRLRGIY. . . . . . . . . . . . IIVLDEIDFLPKRPGGQDLLYRITRINQELVSLVGITNSL
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   117..120.........130.........140.... .....150.........160.........170.........180....
 
   300.........310
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Query Sequence  QLASVEAGAVL
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Template Sequence  GFVENLEPRVK
Template Known Secondary structure  TTSSSS
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   190.........200
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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