Job Description P04993 Confidence 98.39% Date Thu Jan 5 10:58:32 GMT 2012 Rank 76 Aligned Residues 118 % Identity 25% Template c2qeqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:flavivirin protease ns3 catalytic subunit; PDBTitle: crystal structure of kunjin virus ns3 helicase Resolution 3.10 Å

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		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.		.	.	.	240	.
Predicted Secondary structure																	.																																																											.
Query SS confidence																	.																																																											.
Query Sequence		R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	.	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	.	A	S	T	L	H
Query Conservation																	.																																																											.
Alig confidence																	.														.	.	.	.																																										.
Template Conservation																															.	.	.	.
Template Sequence		K	Q	I	T	V	L	D	L	H	P	G	A	G	K	T	R	R	I	L	P	Q	I	I	K	E	A	I	N	R	.	.	.	.	R	L	R	T	A	V	L	A	P	T	R	V	V	A	A	E	M	A	E	A	L	R	G	L	P	I	R	Y	Q	T	S	A	N	G	N	E	I	V	D	V	M	C	H	A	T	L	T
Template Known Secondary structure											S	S	T	T	T	T	T	T												T	.	.	.	.	T								S	S												T	T	S											S
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.					.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	.	.	.	.	I	D	A	L	P	D	H	A	R	V	I	F	L
Query Conservation																																											.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.
Template Sequence		H	R	L	M	S	P	H	R	.	.	.	.	.	.	.	.	.	.	V	P	N	Y	N	L	F	V	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	S	T	R	V	E	L	G	E	A	A	A	I	F	M
Template Known Secondary structure						S	S	S		.	.	.	.	.	.	.	.	.	.					S					S	S	T	T																			T	T	S
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.											.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions