Job Description P04993 Confidence 98.44% Date Thu Jan 5 10:58:32 GMT 2012 Rank 69 Aligned Residues 166 % Identity 22% Template c2og2A_ PDB info PDB header:protein transport Chain: A: PDB Molecule:putative signal recognition particle receptor; PDBTitle: crystal structure of chloroplast ftsy from arabidopsis2 thaliana Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	V	A	R	F	F	N	E	V	N	H	A	I	E	V	D	E	A	L	L	A	Q	T	L	D	K	L	F	P	V	.	.	.	.	.	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	R	I	S	V	I	S	G	G	P	G	T	G
Query Conservation																																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	R	V	L	D	E	L	E	E	A	L	L	V	S	D	F	G	P	K	I	T	V	R	I	V	E	R	L	R	E	D	I	M	S	G	K	L	K	S	G	S	E	I	K	D	A	L	K	E	S	V	L	E	M	L	A	K	K	T	E	L	Q	L	G	F	R	K	P	A	V	I	M	I	V	G	V	N	G	G	G
Template Known Secondary structure															T	T																			T	T	S			S																					S					S	S	S	S									T	T	S
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H
Query Conservation
Alig confidence																					.	.	.														.	.																														.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.														.	.																														.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	T	S	L	G	K	L	A	H	R	L	K	N	E	G	T	K	V	.	.	.	L	M	A	A	G	D	T	F	R	A	A	A	S	.	.	D	Q	L	E	I	W	A	E	R	T	G	C	E	I	V	V	A	E	G	D	K	A	K	A	A	T	V	L	S	.	.	.	.	.	.	.	.	.	.	K	A	V	K
Template Known Secondary structure																T	T				.	.	.								S						.	.											T							S	S	S	S									.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.	.	.														.	.																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.				.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.											200	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.			.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.									.	290	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.																	.	.	.	.	.	.	.	.
Query SS confidence																		.	.																	.	.	.	.	.	.	.	.
Query Sequence		A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	.	.	M	I	D	L	P	M	M	S	R	L	I	D	A	L	P	D	.	.	.	.	.	.	.	.	H	A	R	V	I	F	L	G	D
Query Conservation																		.	.																	.	.	.	.	.	.	.	.
Alig confidence																		.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	G	K	E	E	G	Y	D	V	V	L	C	D	T	S	G	R	L	H	T	N	Y	S	L	M	E	E	L	I	A	C	K	K	A	V	G	K	I	V	S	G	A	P	N	E	I	L	L	V	L	D
Template Known Secondary structure						T	T		S										S	S																				S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions