Job Description P04993 Confidence 99.92% Date Thu Jan 5 10:58:32 GMT 2012 Rank 13 Aligned Residues 139 % Identity 17% Template c2l8bA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein trai; PDBTitle: trai (381-569) Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.			.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																						.	.												.
Query SS confidence																						.	.												.
Query Sequence		F	P	V	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	R	.	.	R	I	S	V	I	S	G	G	P	G	T	.	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R
Query Conservation																						.	.												.
Alig confidence																						.	.												.																	.	.	.	.																							.	.	.	.
Template Conservation																																																				.	.	.	.																							.	.	.	.
Template Sequence		E	K	S	V	P	R	T	A	G	Y	S	D	A	V	S	V	L	A	Q	D	R	P	S	L	A	I	V	S	G	Q	G	G	A	A	G	Q	R	E	R	V	A	E	L	V	M	M	A	R	E	Q	.	.	.	.	G	R	E	V	Q	I	I	A	A	D	R	R	S	Q	M	N	M	K	Q	D	E	R	.	.	.	.
Template Known Secondary structure		G	G																			S							B		S	S		S																	T	.	.	.	.	T								S	T	T							S		T	T	T	.	.	.	.
Template Predicted Secondary structure																																																				.	.	.	.																							.	.	.	.
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.					460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	.	A	L	P	D	H	A	R	V	I	F	L	G	D	R	D	Q
Query Conservation																																																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.																																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	G	E	L	I	T	G	R	R	.	.	.	.	.	.	.	.	Q	L	L	E	G	M	A	F	T	P	G	S	T	V	I	V	D	Q	G	E	K	L	S	L	K	E	T	L	T	L	L	D	G	A	A	R	H	N	V	Q	V	L	I	T	D	S	G	Q	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.		S	S		S	S	S	T	T	T	.	.	.	.	.	.	.	.	T	T	T	T	S														S	S	S																T	T								S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.
Template SS confidence
															482	.	.	.	.	.	.	.	490	.									.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		301	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S	V	E	A	G	A	V	L	G	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	G	T	G	S	A	L	M	A	M	K	D
Template Known Secondary structure		T		S
Template Predicted Secondary structure
Template SS confidence
		541	.	.	.	.	.	.	.	.	550	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions