Job Description P04993 Confidence 98.15% Date Thu Jan 5 10:58:32 GMT 2012 Rank 107 Aligned Residues 161 % Identity 15% Template c2kbeA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase dbp5; PDBTitle: solution structure of amino-terminal domain of dbp5p Resolution UNK

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		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		E	A	L	L	A	Q	T	L	D	K	L	F	P	V	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	.	.	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R
Query Conservation																															.	.
Alig confidence													.																		.	.																																	.
Template Conservation													.																																																				.
Template Sequence		A	P	E	L	L	K	G	I	Y	A	M	.	K	F	Q	K	P	S	K	I	Q	E	R	A	L	P	L	L	L	H	N	P	P	R	N	M	I	A	Q	S	Q	S	G	T	G	K	T	A	A	F	S	L	T	M	L	T	R	V	N	P	E	D	A	.	S	P	Q	A	I	C	L	A	P	S	R	E	L	A	R	Q
Template Known Secondary structure												S	.	S	S	S				S									S	S			S	S							S	S	T	T																		T	T		.									S	S
Template Predicted Secondary structure													.																																																				.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.					.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.						.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																											.	.	.	.																				.	.	.	.	.
Query SS confidence																																											.	.	.	.																				.	.	.	.	.
Query Sequence		L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	.	.	.	.	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	.	.	.	.	.	S	M	I	D	L	P	M	M	S	R	L
Query Conservation																																											.	.	.	.																				.	.	.	.	.
Alig confidence																																											.	.	.	.																				.	.	.	.	.
Template Conservation
Template Sequence		T	L	E	V	V	Q	E	M	G	K	F	T	K	I	T	S	Q	L	I	V	P	D	S	F	E	K	N	K	Q	I	N	A	Q	V	I	V	G	T	P	G	T	V	L	D	L	M	R	R	K	L	M	Q	L	Q	K	I	K	I	F	V	L	D	E	A	D	N	M	L	D	Q	Q	G	L	G	D	Q	C	I	R	V
Template Known Secondary structure										S	T	T		S							S	T	T		S			S	S					S						T	T	T							T	T	S			T	T	S															S	T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	A	L	P	D	H	A	R	V	I	F	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	R	F	L	P	K	D	T	Q	L	V	L	F	S
Template Known Secondary structure					T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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