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Job DescriptionP04993
Confidence97.21%DateThu Jan 5 10:58:32 GMT 2012
Rank228Aligned Residues121
% Identity13%Templatec2iusB_
PDB info PDB header:membrane proteinChain: B: PDB Molecule:dna translocase ftsk; PDBTitle: e. coli ftsk motor domain
Resolution2.7 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   165....170.........180.........190.........200...... ...210.........220
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Query Sequence  RISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTG. . . . . . . . . . . . . . . . . . . . . . . . KAAARLTESLGKAL
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Template Sequence  PHLLVAGTTGSGASVGVNAMILSMLYKAQPEDVRFIMIDPKMLELSVYEGIPHLLTEVVTDMKDAANALRWCVNEMERRY
Template Known Secondary structure 
S

TTSSTT

TTT
TTSSSSGGGTT
TTBSSS
B
S
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   985....990.........1000.........1010.........1020.........1030.........1040.........1050.........1060....
 
   221........230.........240.........250.........260.........270.........280......
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Query Sequence  RQLPLTDEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMSRLIDAL
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Template Sequence  KLMSAL. GVRNLAGYNEKIAEADRMMRPIPDPYWHPVLKKEPYIVVLVDEFADLMMTVGKKVEELI
Template Known Secondary structure  T.T
SSTT


B
TT


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   1065....1070 .........1080.........1090.........1100.........1110.........1120.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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