Job Description P04993 Confidence 98.60% Date Thu Jan 5 10:58:32 GMT 2012 Rank 51 Aligned Residues 136 % Identity 16% Template c2fwrA_ PDB info PDB header:dna binding protein Chain: A: PDB Molecule:dna repair protein rad25; PDBTitle: structure of archaeoglobus fulgidis xpb Resolution 2.60 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.
Template Conservation																																										.	.	.	.	.	.	.
Template Sequence		S	L	R	D	Y	Q	E	K	A	L	E	R	W	L	V	D	K	R	G	C	I	V	L	P	T	G	S	G	K	T	H	V	A	M	A	A	I	N	E	L	.	.	.	.	.	.	.	S	T	P	T	L	I	V	V	P	T	L	A	L	A	E	Q	W	K	E	R	L	G	I	F	G	E	E	Y	V	G	E	F	S
Template Known Secondary structure			B												T	T	T	T								T	T	S														.	.	.	.	.	.	.		S							S	S											G	G	G	G		G	G	G				B	S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	P	D	H	A	R	V	I	F	L	G	D	R
Query Conservation
Alig confidence											.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		G	R	I	K	E	L	K	P	L	.	.	.	.	.	.	.	T	V	S	T	Y	D	S	A	Y	V	N	A	E	K	L	G	N	R	F	M	L	L	I	F	D	E	V	H	H	L	P	A	E	S	Y	V	Q	I	A	Q	M	S	I	A	P	F	R	L	G	L	T	A	T	F
Template Known Secondary structure		S	S		B				S		.	.	.	.	.	.	.											T					T	T	T		S						T	G	G	G	T	T	S	T	T	T						T				S							S
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.								.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions