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Job DescriptionP04993
Confidence96.66%DateThu Jan 5 10:58:32 GMT 2012
Rank327Aligned Residues114
% Identity18%Templatec2fsgA_
PDB info PDB header:protein transportChain: A: PDB Molecule:preprotein translocase seca subunit; PDBTitle: complex seca:atp from escherichia coli
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  NWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKK
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Template Sequence  DVQLLGGXVLNERC. . IAEXRTGEGKTLTAT. LPAYLNAL. . . TGKGVHVVTVNDYLAQRDAENNRPLFEFLGLTVGINL
Template Known Secondary structure  TTSS..

TTS
T.T...TSS

SSTT



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   85....90........ .100.........110... ......120. ........130.........140.........150........
 
   232.......240.........250..... ....260.........270.
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Query Sequence  RIPEDASTLHRLLGAQPGSQRLRH. . . . . . . . . . . . . HAGNPLHLDVLVVDEA
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Template Sequence  PGXPAPAKREAYAADITYGTNNEYGFDYLRDNXAFSPEERVQRKLHYALVDEV
Template Known Secondary structure  TT

SSTT
SSGGG






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   159160.........170.........180.........190.........200.........210.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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