Job Description P04993 Confidence 98.24% Date Thu Jan 5 10:58:32 GMT 2012 Rank 94 Aligned Residues 123 % Identity 16% Template c2db3D_ PDB info PDB header:hydrolase/rna Chain: D: PDB Molecule:atp-dependent rna helicase vasa; PDBTitle: structural basis for rna unwinding by the dead-box protein2 drosophila vasa Resolution 2.20 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180		.	.	.	.	.	.	.	.	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																		.														.	.	.
Query SS confidence																																		.														.	.	.
Query Sequence		D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	.	V	A	K	L	L	A	A	L	I	Q	M	A	D	.	.	.	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P
Query Conservation																																		.														.	.	.
Alig confidence																																		.														.	.	.
Template Conservation
Template Sequence		I	P	T	P	I	Q	K	C	S	I	P	V	I	S	S	G	R	D	L	M	A	C	A	Q	T	G	S	G	K	T	A	A	F	L	L	P	I	L	S	K	L	L	E	D	P	H	E	L	E	L	G	R	P	Q	V	V	I	V	S	P	T	R	E	L	A	I	Q	I	F	N	E	A	R	K	F	A	F	E	S	Y
Template Known Secondary structure		S														T	T									T	T	S																	S					B	T	T	B		S						S	S															T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.									.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.
Query Sequence		L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	.	.	.	.	.	.	.	.	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A
Query Conservation																													.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	I	G	I	V	Y	G	G	T	S	F	R	H	Q	N	E	C	I	T	R	G	C	H	V	V	I	A	T	P	G	R	L	L	D	F	V	D	R	T	F	I	T	F	E	D	T	R	F	V	V	L	D	E	A
Template Known Secondary structure									S	S	S											T			S																T	S	S			T	T								T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions