Job Description P04993 Confidence 98.62% Date Thu Jan 5 10:58:32 GMT 2012 Rank 48 Aligned Residues 163 % Identity 23% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

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		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.											.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.
Query Sequence		R	T	V	A	R	F	F	N	E	V	N	H	A	I	E	V	D	E	A	L	L	A	Q	T	L	D	K	L	F	P	V	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	R	.	.	.	.	.	.	.	.	.	.	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.
Alig confidence																																						.	.											.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.
Template Sequence		E	E	V	L	E	E	L	E	M	A	L	L	A	A	D	V	G	L	S	A	T	E	E	I	L	Q	E	V	R	A	S	G	R	K	D	L	.	.	K	E	A	V	K	E	K	L	V	G	M	L	E	P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R
Template Known Secondary structure		T												T	T	T																			S		S	.	.												T							S	S	S							S	T	T	S	S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.			.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L
Query Conservation
Alig confidence											.	.	.														.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.														.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	Y	Q	N	L	G	K	K	V	.	.	.	M	F	C	A	G	D	T	F	R	A	A	G	G	.	.	T	Q	L	S	E	W	G	K	R	L	S	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	.	.	.	.	.	.	.	.	.	.	.	Q	A	M	K	A	R	G	Y	D	L	L
Template Known Secondary structure					T	T	T				.	.	.								S	S	T	T			.	.											T								T	T	S											.	.	.	.	.	.	.	.	.	.	.						T	T		S
Template Predicted Secondary structure											.	.	.														.	.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.			.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.												.	.	180	.	.	.	.	.	.	.	.
		267	.	.	270	.			.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.									.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure							.	.																	.	.	.	.	.	.	.	.
Query SS confidence							.	.																	.	.	.	.	.	.	.	.
Query Sequence		V	V	D	E	A	.	.	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	P	.	.	.	.	.	.	.	.	D	H	A	R	V	I	F	L	G	D
Query Conservation							.	.																	.	.	.	.	.	.	.	.
Alig confidence							.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D
Template Known Secondary structure										T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions