Job Description P04993 Confidence 98.15% Date Thu Jan 5 10:58:32 GMT 2012 Rank 110 Aligned Residues 167 % Identity 13% Template c1z3iX_ PDB info PDB header:recombination/dna binding Chain: X: PDB Molecule:similar to rad54-like; PDBTitle: structure of the swi2/snf2 chromatin remodeling domain of eukaryotic2 rad54 Resolution 3.00 Å

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		147	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.				.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.																																							.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.																																							.	.	.
Query Sequence		V	S	D	E	I	N	W	Q	K	V	A	A	A	.	.	.	.	.	.	.	.	.	V	A	L	T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	.	.	.	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E
Query Conservation															.	.	.	.	.	.	.	.	.																																							.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.																																							.	.	.
Template Conservation
Template Sequence		S	K	V	L	R	P	H	Q	R	E	G	V	K	F	L	W	D	C	V	T	G	R	R	I	E	N	S	Y	G	C	I	M	A	D	E	M	G	L	G	K	T	L	Q	C	I	T	L	I	W	T	L	L	K	Q	S	P	D	C	K	P	E	I	D	K	V	I	V	V	S	P	S	S	L	V	R	N	W	Y	N	E
Template Known Secondary structure			T	T																	T	T	S	S	S	T	T										T	T	S																		T	T	S	S		S		S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.													.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Query Sequence		S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	.	.	.	.	.	.	.	.	.	.	.	.	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	.	.	D	L	P	M	M	S
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.																					.	.
Template Conservation
Template Sequence		V	G	K	W	L	G	G	R	V	Q	P	V	A	I	D	G	G	S	K	D	E	I	D	S	K	L	V	N	F	I	S	Q	Q	G	M	R	I	P	T	P	I	L	I	I	S	Y	E	T	F	R	L	H	A	E	V	L	H	K	G	K	V	G	L	V	I	C	D	E	G	H	R	L	K	N	S	D	N	Q	T	Y
Template Known Secondary structure							G	G	G								S	S																	S	S			S															T	T	T	T	T	T	S								T	T	G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	I	D	A	L	P	D	H	A	R	V	I	F	L	G	D	R	D	Q	L	A	S	V	E	A	G	A	V	L	G	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	L	N	S	M	N	A	Q	R	R	V	L	I	S	G	T	P	I	Q	N	D	L	L	E	Y	F	S	L	V	H	F	V
Template Known Secondary structure										S							S	S		S	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions