Job Description P04993 Confidence 98.44% Date Thu Jan 5 10:58:32 GMT 2012 Rank 70 Aligned Residues 119 % Identity 19% Template c1ymfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:genome polyprotein [contains: flavivirin PDBTitle: crystal structure of yellow fever virus ns3 helicase2 complexed with adp Resolution 2.60 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230							.	.	.	.	.
Predicted Secondary structure																		.																																																					.	.	.	.	.	.
Query SS confidence																		.																																																					.	.	.	.	.	.
Query Sequence		T	R	R	I	S	V	I	S	G	G	P	G	T	G	K	T	.	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	.	.	.	.	.	.	K	R	I	P	E
Query Conservation																		.																																																					.	.	.	.	.	.
Alig confidence																		.														.	.	.	.																																				.	.	.	.	.	.
Template Conservation																																.	.	.	.
Template Sequence		K	G	X	T	T	V	L	D	F	H	P	G	A	G	K	T	R	R	F	L	P	Q	I	L	A	E	C	A	R	R	.	.	.	.	R	L	R	T	L	V	L	A	P	T	R	V	V	L	S	E	X	K	E	A	F	H	G	L	D	V	K	F	H	T	Q	A	F	S	A	H	G	S	G	R	E	V	I	D	A	X
Template Known Secondary structure		T	T									T	T	S		T	T	T	T													.	.	.	.	T								S	S												T	T	S						S	S								S	S
Template Predicted Secondary structure																																.	.	.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.					.	.	290	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	P	.	.	.	.	D	H	A	R	V	I	F	L
Query Conservation																																																						.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		C	H	A	T	L	T	Y	R	X	L	E	P	T	R	V	V	.	.	.	.	.	.	.	.	.	.	N	W	E	V	I	I	X	D	E	A	H	F	L	D	P	A	S	I	A	A	R	G	W	A	A	H	R	A	R	A	N	E	S	A	T	I	L	X
Template Known Secondary structure												S	S					.	.	.	.	.	.	.	.	.	.			S					T	T	T	T			S																T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.											.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions