Job Description P04993 Confidence 97.73% Date Thu Jan 5 10:58:32 GMT 2012 Rank 170 Aligned Residues 108 % Identity 23% Template c1sxjE_ PDB info
PDB header: replicationChain: E: PDB Molecule: activator 1 40 kda subunit;
PDBTitle: crystal structure of the eukaryotic clamp loader2 (replication factor c, rfc) bound to the dna sliding clamp3 (proliferating cell nuclear antigen, pcna)
Resolution 2.85 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
151 . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210 . . . . . . . . . 220 . . .
Predicted Secondary structure
. . . . . . .
Query SS confidence
.
.
.
.
.
.
.
Query Sequence
I N W Q K V A A A V A L T R .
.
.
.
R I S V I S G G P G T G K T T T V A K L L A A L I Q M A D G E R .
.
.
C R I R L A A P T G K A A A R L T E S L G K A L R Q L
Query Conservation
. . . . . . .
Alig confidence
. . . . . . . . . . . . . . .
Template Conservation
. . . . . . . .
Template Sequence
N E E L T N F L K S L S D Q P R D L P H L L L Y G P N G T G K K T R C M A L L E S I F G P G V Y R N V V S S P Y H L E I T P S N D R I V I Q E L .
.
.
.
.
.
.
.
Template Known Secondary structure
T T T T T T S T T S S T S T T S S . . . . . . . .
Template Predicted Secondary structure
. . . . . . . .
Template SS confidence
19 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70 . . . . . . . . . 80 . . . . . . . . . 90
224 . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280 . . . . . . . . . 290 . . . . .
Predicted Secondary structure
Query SS confidence
Query Sequence
P L T D E Q K K R I P E D A S T L H R L L G A Q P G S Q R L R H H A G N P L H L D V L V V D E A S M I D L P M M S R L I D A L P D H A R V I F L
Query Conservation
Alig confidence
. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Conservation
. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Sequence
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
.
L K E V A Q M E Q R Y K C V I I N E A N S L T K D A Q A A L R R T M E K Y S K N I R L
Template Known Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . . . T T T T T T S S S T T T
Template Predicted Secondary structure
. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template SS confidence
113 . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150 . . . . .
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre serverKelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]
