Return to main results Retrieve Phyre Job Id

Job DescriptionP04993
Confidence99.25%DateThu Jan 5 10:58:32 GMT 2012
Rank23Aligned Residues48
% Identity33%Templatec1qhhD_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:protein (pcra (subunit)); PDBTitle: structure of dna helicase with adpnp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   535....540.........550.........560.. .......570.........580..
Predicted Secondary structure 















............



Query SS confidence 



























. . . . . . . . . . . .



















Query Sequence  AMTVHKSQGSEFDHAALILPSQRTPVVT. . . . . . . . . . . . RELVYTAVTRARRRLSLYAD
Query Conservation 
 






 
 
 


           ............
 









  
 
 
 
Alig confidence 



























............



















Template Conservation 
 


 





  
 
        
        
   








 



  
 
   
Template Sequence  LMTLHAAKGLEFPVVFLIGMEEGIFPHNRSLEDDDEMEEERRLAYVGITRAEEELVLTSA
Template Known Secondary structure 


GGGGTT




BTBTTTBTTTTT
TT


Template Predicted Secondary structure 






















Template SS confidence 



























































   561........570.........580.........590.........600.........610.........620
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions