Return to main results Retrieve Phyre Job Id

Job DescriptionP04993
Confidence99.54%DateThu Jan 5 10:58:32 GMT 2012
Rank19Aligned Residues105
% Identity19%Templatec1qhhA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein (pcra (subunit)); PDBTitle: structure of dna helicase with adpnp
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   148.150.........160.........170.........180.........190.........200.........210.........220.......
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  SDEINWQKVAAAVALTRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTD
Query Conservation    
   
  

         

 
 






 
   
  
          


 


 


  
   
           
Alig confidence 












..
































































Template Conservation    
  

   
  ..     

 
 





  
  
   

         

 



  

  
  

           
Template Sequence  AHLNKEQQEAVRT. . TEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAREMRERVQSLLGGAAEDV
Template Known Secondary structure  TTS

..
SS






TTS
TT


GGG
SSGGGGTTS
Template Predicted Secondary structure 


..



















Template SS confidence 















































































   10.........20.. .......30.........40.........50.........60.........70.........80.......
 
   228.230.........240.........250....
Predicted Secondary structure 








Query SS confidence 


























Query Sequence  EQKKRIPEDASTLHRLLGAQPGSQRLR
Query Conservation           
 

   
          
Alig confidence 


























Template Conservation   
 
 

     
              
Template Sequence  WISTFHSMCVRILRRDIDRIGINRNFS
Template Known Secondary structure  GGGGT

TT

Template Predicted Secondary structure 










Template SS confidence 


























   88.90.........100.........110....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions