Job Description P04993 Confidence 97.98% Date Thu Jan 5 10:58:32 GMT 2012 Rank 128 Aligned Residues 138 % Identity 13% Template c1jr3E_ PDB info PDB header:transferase Chain: E: PDB Molecule:dna polymerase iii, delta' subunit; PDBTitle: crystal structure of the processivity clamp loader gamma2 complex of e. coli dna polymerase iii Resolution 2.70 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.								.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.
Query Sequence		N	W	Q	K	V	A	A	A	V	A	L	T	R	.	.	.	.	.	.	.	R	I	S	V	I	S	G	G	P	G	T	G	K	T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P
Query Conservation															.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.																																		.	.	.	.
Template Conservation																																																							.	.	.	.
Template Sequence		P	W	L	R	P	D	F	E	K	L	V	A	S	Y	Q	A	G	R	G	H	H	A	L	L	I	Q	A	L	P	G	M	G	D	D	A	L	I	Y	A	L	S	R	Y	L	L	C	Q	Q	P	Q	G	H	K	.	.	.	.	S	C	G	H	C	R	G	C	Q	L	M	Q	A	G	T	H	P	D	Y	Y	T	L	A
Template Known Secondary structure		T	T										T	T	T	T	T	S				S								T	T	S	S													T		S	S			S	S	S	.	.	.	.			S		S								T	S			S	S
Template Predicted Secondary structure																																																							.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.					.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.				.	.	.	290	.	.	.	.	.		.	.	.	.	300
Predicted Secondary structure																																																																.	.	.										.
Query SS confidence																																																																.	.	.										.
Query Sequence		L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A	S	M	I	D	L	P	M	M	S	R	L	I	D	A	L	.	.	.	P	D	H	A	R	V	I	F	L	.	G	D	R	D	Q
Query Conservation																																																																.	.	.										.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																										.	.	.										.
Template Conservation																													.	.	.	.	.	.	.	.	.	.
Template Sequence		P	E	K	G	K	N	T	L	G	V	D	A	V	R	E	V	T	E	K	L	N	E	H	A	R	L	G	.	.	.	.	.	.	.	.	.	.	G	A	K	V	V	W	V	T	D	A	A	L	L	T	D	A	A	A	N	A	L	L	K	T	L	E	E	P	P	A	E	T	W	F	F	L	A	T	R	E	P	E	R
Template Known Secondary structure				T	T	S	S	S	B													S	S			T	T	S	.	.	.	.	.	.	.	.	.	.	S							S		G	G	G	B														S			T	T								S		S	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.											.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		301	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	L	A
Template Known Secondary structure		S		T
Template Predicted Secondary structure
Template SS confidence
		151	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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