Job Description P04993 Confidence 98.80% Date Thu Jan 5 10:58:32 GMT 2012 Rank 33 Aligned Residues 162 % Identity 14% Template c1gm5A_ PDB info PDB header:helicase Chain: A: PDB Molecule:recg; PDBTitle: structure of recg bound to three-way dna junction Resolution 3.24 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.			.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.							.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.																		.	.	.	.	.	.
Query SS confidence																																												.	.																		.	.	.	.	.	.
Query Sequence		R	L	Y	L	N	R	M	W	C	N	E	R	T	V	A	R	F	F	N	E	V	N	H	A	I	E	V	D	E	A	L	L	A	Q	T	L	D	K	L	F	P	V	.	.	S	D	E	I	N	W	Q	K	V	A	A	A	V	A	L	T	R	.	.	.	.	.	.	R	I	S	V	I	S	G	G	P	G	T	G	K
Query Conservation																																												.	.																		.	.	.	.	.	.
Alig confidence																																												.	.																		.	.	.	.	.	.
Template Conservation
Template Sequence		R	L	A	Y	E	E	L	F	V	L	Q	L	A	F	Q	K	I	R	K	E	R	E	K	H	G	G	I	P	K	K	I	E	G	K	L	A	E	E	F	I	K	S	L	P	F	K	L	T	N	A	Q	K	R	A	H	Q	E	I	R	N	D	M	I	S	E	K	P	M	N	R	L	L	Q	G	D	V	G	S	G	K
Template Known Secondary structure																																		T										S	S	S																			S	S	S										S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																																																													.	.	.	.	.
Query SS confidence																																																																													.	.	.	.	.
Query Sequence		T	T	T	V	A	K	L	L	A	A	L	I	Q	M	A	D	G	E	R	C	R	I	R	L	A	A	P	T	G	K	A	A	A	R	L	T	E	S	L	G	K	A	L	R	Q	L	P	L	T	D	E	Q	K	K	R	I	P	E	D	A	S	T	L	H	R	L	L	G	A	Q	P	G	S	Q	R	.	.	.	.	.
Query Conservation																																																																													.	.	.	.	.
Alig confidence																.	.	.	.																																																										.	.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		T	V	V	A	Q	L	A	I	L	D	N	Y	E	A	.	.	.	.	G	F	Q	T	A	F	M	V	P	T	S	I	L	A	I	Q	H	Y	R	R	T	V	E	S	F	S	K	F	N	I	H	V	A	L	L	I	G	A	T	T	P	S	E	K	E	K	I	K	S	G	L	R	N	G	Q	I	D	V	V	I	G	T
Template Known Secondary structure																.	.	.	.	T	S							S																	T		S	S								S	S	S														S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		403	.	.	.	.	.	.	410	.	.	.	.	.	.					.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.
				253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	L	R	H	H	A	G	N	P	L	H	L	D	V	L	V	V	D	E	A
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		H	A	L	I	Q	E	D	V	H	F	K	N	L	G	L	V	I	I	D	E	Q
Template Known Secondary structure		T	T									S									S
Template Predicted Secondary structure
Template SS confidence
		479	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions