Return to main results Retrieve Phyre Job Id

Job DescriptionP04993
Confidence98.35%DateThu Jan 5 10:58:32 GMT 2012
Rank83Aligned Residues121
% Identity17%Templatec1cu1B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:protein (protease/helicase ns3); PDBTitle: crystal structure of an enzyme complex from hepatitis c2 virus
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   163......170.........180.........190.........200.........210.........220.........230.........240..
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  TRRISVISGGPGTGKTTTVAKLLAALIQMADGERCRIRLAAPTGKAAARLTESLGKALRQLPLTDEQKKRIPEDASTLHR
Query Conservation       

 
 






 
   
  
          


 


 


  
   
                    
 

  
Alig confidence 
















...








....








































.....
Template Conservation 
  
 

 








...


  

  ....
 











 


  

   
   
  

  

   .....
Template Sequence  SFQVAHLHAPTGSGKST. . . KVPAAYAAQ. . . . GYKVLVLNPSVAATLGFGAYMSKAHGIDPNIRTGVRTITTG. . . . . A
Template Known Secondary structure  S


TTS
TTT...T....T

S





SS



.....
Template Predicted Secondary structure 








...
....









.....
Template SS confidence 















































































   1196...1200.........1210.. .......1220. ........1230.........1240.........1250.........1260.. .
 
   243......250.........260.........270........ .280....... ..290.....
Predicted Secondary structure 



















.....


Query SS confidence 



































. . .








. .







Query Sequence  LLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPM. . . MSRLIDALP. . DHARVIFL
Query Conservation   
                
  
 








    ...   

  
 ..   




Alig confidence 



































...








..







Template Conservation   
   
 
 

      
   
 









  







  
   
  





Template Sequence  PVTYSTYGKFLADGGCSGGAYDIIICDECHSTDSTTILGIGTVLDQAETAGARLVVLA
Template Known Secondary structure  STTS

TTS
STTTT

STTTTT
S
Template Predicted Secondary structure 






















Template SS confidence 

























































   1264.....1270.........1280.........1290.........1300.........1310.........1320.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions