 |
Job Description | P0AF67 | Confidence | 92.38% | Date | Thu Jan 5 11:25:24 GMT 2012 |
Rank | 418 | Aligned Residues | 50 |
% Identity | 18% | Template | c2ywfA_ |
PDB info |
PDB header:translation | Chain: A: PDB Molecule:gtp-binding protein lepa; |
PDBTitle: crystal structure of gmppnp-bound lepa from aquifex aeolicus
|
Resolution | 2.24 Å |
|
  |   |
31 | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | |
. | . | . | 60 | . | . | . | . | . | . | . | . | . | |
70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |  | . |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | Y | L | Y | G | D | L | G | A | G | K | T | T | F | S | R | G | F | L | Q | A | L | G | H | Q | G | . |
N | V | K | S | P | T | Y | T | L | V | E | P | Y | . |
T | L | D | N | L | M | V | Y | H | F | D |
Query Conservation |   |
|   |
|   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|   |   |   |
|
|   |   |   | . |   |
|   |
|
|
|
|   |
|
|   |   |
| . |   |   |   |   |   |   |
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|   |
|
|
|
|
|   |   |   |
|
|   |   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
Template Sequence |   |
F | C | I | I | A | H | V | D | H | G | K | S | T | L | A | D | R | L | L | E | Y | T | G | A | I | G | I | T | V | K | M | Q | A | V | R | M | F | Y | K | A | K | D | G | N | T | Y | K | L | H | L | I | D |
Template Known Secondary structure |   |
 |  |  |  |  |
| T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|
|
| S |
| S |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
9 | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|