Job Description P37047 Confidence 31.67% Date Thu Jan 5 11:54:38 GMT 2012 Rank 202 Aligned Residues 145 % Identity 13% Template c3qyyB_ PDB info PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp Resolution 1.90 Å

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		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.
Predicted Secondary structure																												.	.	.																		.	.	.	.	.																								.
Query SS confidence																												.	.	.																		.	.	.	.	.																								.
Query Sequence		L	R	E	E	L	V	M	N	L	I	Q	A	E	E	N	T	P	A	L	T	E	W	A	Q	R	L	.	.	.	G	I	D	L	N	Q	P	R	V	V	A	I	V	E	V	D	S	.	.	.	.	.	G	Q	L	G	V	D	S	A	M	A	E	L	Q	Q	L	Q	N	A	L	T	T	P	E	.	R	N	N	L	V
Query Conservation																												.	.	.																		.	.	.	.	.																								.
Alig confidence																												.	.	.																		.	.	.	.	.																								.
Template Conservation
Template Sequence		L	K	R	H	A	L	F	D	P	L	T	E	A	L	N	R	R	G	C	E	Q	A	M	R	D	S	V	T	A	A	Q	R	E	G	W	P	F	V	L	F	V	L	D	M	D	N	L	K	P	I	N	D	R	F	G	H	L	A	G	D	R	V	L	V	R	L	V	E	S	A	Y	G	W	L	G	A	Q	D	W	I
Template Known Secondary structure								B		T	T	T		S	B																			T												S	S																										T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	V	S	L	T	E	M	V	V	L	K	P	A	L	N	S	F	G	R	W	D	A	E	D	H	R	K	R	V	E	Q	L	I	T	R	M	K	E	Y	G	Q	L	R	F	R	V	S	L	G	N	Y	F	T	G	P	G	S	I	A	R	S	Y	R	T	A	K	T	T	M	V	V	G	K	Q	R	M	P	E	S
Query Conservation
Alig confidence																	.	.	.	.	.	.																																							.	.	.
Template Conservation																	.	.	.	.	.	.																																							.	.	.
Template Sequence		G	R	W	G	G	D	E	F	L	I	G	V	H	A	S	.	.	.	.	.	.	E	D	E	A	T	L	K	L	N	Q	W	L	S	M	L	E	E	A	P	L	H	V	S	A	G	S	A	V	C	E	V	G	I	D	A	T	E	L	.	.	.	Y	R	R	A	D	A	A	M	Y	R	A	K	F	S	G	G	R	R
Template Known Secondary structure						T	T								S		.	.	.	.	.	.																															T	T							.	.	.														T	T	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.																																							.	.	.
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.							.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.				.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		282	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		287	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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