Job Description P37047 Confidence 100.00% Date Thu Jan 5 11:54:38 GMT 2012 Rank 1 Aligned Residues 240 % Identity 16% Template c3onqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:regulator of polyketide synthase expression; PDBTitle: crystal structure of regulator of polyketide synthase expression2 bad_0249 from bifidobacterium adolescentis Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	S	R	L	R	E	E	L	V	M	N	L	I	Q	A	E	E	N	T	P	A	L	T	E	W	A	Q	R	L	G	I	D	L	N	Q	P	R	V	V	A	I	V	E	V	D	S	G	Q	L	G	V	D	S	A	M	A	E	L	Q	Q	L	Q	N	A	L	T	T	P	E	R	N	N	L	V	A	I	V	S	L	T
Query Conservation
Alig confidence																	.																															.	.	.	.	.	.
Template Conservation																	.																															.	.	.	.	.	.
Template Sequence		D	T	T	I	E	R	L	A	F	E	C	L	L	T	N	.	X	T	D	D	R	V	V	S	L	X	N	I	L	G	W	Q	G	D	F	N	C	F	A	I	G	G	V	P	S	A	.	.	.	.	.	.	S	L	A	S	T	S	L	A	I	R	K	A	V	R	D	L	G	G	E	H	V	V	I	G	T	Y	G	T
Template Known Secondary structure															T	T	.			S											T			S	S										B	S	S	.	.	.	.	.	.																T	T										T	T
Template Predicted Secondary structure																	.																															.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	V	V	L	K	P	A	L	N	S	F	G	R	W	D	A	E	D	H	R	K	R	V	E	Q	L	I	T	R	M	K	E	Y	G	Q	L	R	F	R	V	S	L	G	N	Y	F	T	G	P	G	S	I	A	R	S	Y	R	T	A	K	T	T	M	V	V	G	K	Q	R	M	P	E	S	R	C	Y	F	Y	Q
Query Conservation
Alig confidence															.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.
Template Sequence		F	L	L	A	L	A	C	Q	X	G	A	V	T	.	.	.	.	.	.	.	.	.	.	P	E	V	T	C	T	A	V	X	P	A	F	S	E	D	E	P	L	Y	L	S	P	V	R	S	G	V	A	G	A	S	H	A	L	R	E	T	X	F	S	L	Q	A	A	P	A	L	S	T	P	S	R	P	L	R	A	D
Template Known Secondary structure											T	T			.	.	.	.	.	.	.	.	.	.									G	G	G	B		T	T	S																												G	G	G		S	S			S	S			T	T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.											.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	M	L	P	V	L	L	D	S	L	R	G	D	W	Q	A	N	E	L	A	R	P	L	A	R	L	K	T	M	D	N	N	G	L	L	R	R	T	L	A	A	W	F	R	H	N	V	Q	P	L	A	T	S	K	A	L	F	I	H	R	N	T	L	E	Y	R	L	N	R	I	S	E	L	T	G	L	D	L	G
Query Conservation
Alig confidence												.
Template Conservation												.
Template Sequence		E	L	L	P	E	R	A	L	L	G	.	D	D	Y	A	R	E	E	L	Y	R	N	V	Y	Q	V	L	R	G	E	N	P	D	D	P	T	Y	L	T	V	S	T	F	L	K	Y	G	S	S	L	E	N	T	A	K	E	L	N	V	H	P	N	T	V	R	Y	R	L	K	R	A	A	E	T	T	G	W	D	A	T
Template Known Secondary structure		T	T								T	.												T							S		T	T		S											T	T	S										T	S																	S			T	T
Template Predicted Secondary structure												.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		368	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	F	D	D	R	L	L	L	Y	V	A	L	Q	L	D	E	E	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	R	D	A	Y	V	L	T	T	A	L	A	I	G	R	X	R
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions