Job Description P37047 Confidence 83.19% Date Thu Jan 5 11:54:38 GMT 2012 Rank 80 Aligned Residues 143 % Identity 13% Template c3i5bA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:wspr response regulator; PDBTitle: crystal structure of the isolated ggdef domain of wpsr from2 pseudomonas aeruginosa Resolution 2.04 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.																			.	.	.	.	.																							.	.
Query SS confidence																					.	.	.																			.	.	.	.	.																							.	.
Query Sequence		N	L	I	Q	A	E	E	N	T	P	A	L	T	E	W	A	Q	R	L	.	.	.	G	I	D	L	N	Q	P	R	V	V	A	I	V	E	V	D	S	G	.	.	.	.	.	Q	L	G	V	D	S	A	M	A	E	L	Q	Q	L	Q	N	A	L	T	T	P	E	.	.	R	N	N	L	V	A	I	V	S	L	T
Query Conservation																					.	.	.																			.	.	.	.	.																							.	.
Alig confidence																					.	.	.																			.	.	.	.	.																							.	.
Template Conservation
Template Sequence		D	G	L	T	G	L	S	N	R	R	H	F	D	E	Y	L	E	M	E	W	R	R	S	L	R	E	Q	S	Q	L	S	L	L	M	I	D	V	D	Y	F	K	S	Y	N	D	T	F	G	H	V	A	G	D	E	A	L	R	Q	V	A	G	A	I	R	E	G	C	S	R	S	S	D	L	A	A	R	Y	G	G	E
Template Known Secondary structure			T	T	T		S	B																				T											T	T																														S	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.											.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		E	M	V	V	L	K	P	A	L	N	S	F	G	R	W	D	A	E	D	H	R	K	R	V	E	Q	L	I	T	R	M	K	E	Y	G	Q	.	.	.	.	.	.	.	.	.	.	L	R	F	R	V	S	L	G	.	.	N	Y	F	T	G	P	G	S	I	A	R	S	Y	R	T	A	K	T	T	M	V	V	G	K
Query Conservation																																						.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence											.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation											.	.	.	.	.	.
Template Sequence		E	F	A	M	V	L	P	G	T	.	.	.	.	.	.	S	P	G	G	A	R	L	L	A	E	K	V	R	R	T	V	E	S	L	Q	I	S	H	D	Q	P	R	P	G	S	H	L	T	V	S	I	G	V	S	T	L	V	P	G	G	G	G	Q	T	F	R	V	L	I	E	M	A	D	Q	A	L	Y	Q	A	K
Template Known Secondary structure									T		.	.	.	.	.	.																			T						S	S	S	T	T																S	S	S			T
Template Predicted Secondary structure											.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.							.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	M	P	E	S	R	C	Y	F	Y	Q
Query Conservation
Alig confidence			.
Template Conservation			.
Template Sequence		N	.	N	G	R	N	Q	V	G	L	M	E
Template Known Secondary structure			.	T	T	S	S	S
Template Predicted Secondary structure			.
Template SS confidence
		328		.	330	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions