Job Description P37047 Confidence 88.22% Date Thu Jan 5 11:54:38 GMT 2012 Rank 56 Aligned Residues 192 % Identity 12% Template c3i5aA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:response regulator/ggdef domain protein; PDBTitle: crystal structure of full-length wpsr from pseudomonas syringae Resolution 2.80 Å

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		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.												.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	I	G	L	T	G	E	P	E	N	L	R	K	Y	G	E	L	V	C	M	T	A	E	M	M	L	E	Q	S	R	L	M	H	L	L	A	Q	D	S	R	L	R	E	E	L	V	M	N	L	I	Q	A	E	E	N	.	.	.	.	.	.	.	.	.	.	.	T	P	A	L	T	E	W	A	Q	R	L	G	I
Query Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	L	V	K	L	P	D	N	I	E	L	V	A	R	I	R	Y	H	S	R	S	Y	M	T	L	L	Q	R	D	E	A	Y	R	A	L	R	V	S	Q	Q	Q	L	L	D	T	N	L	V	L	Q	R	L	M	N	S	D	G	L	T	G	L	S	N	R	R	H	F	D	E	Y	L	E	L	E	W	R	R	A	T
Template Known Secondary structure						S				T	T																																													S	B		T	T	T		S	B
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.	.	.	.	.			.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																									.	.	.	.	.																.	.
Query SS confidence																									.	.	.	.	.																.	.
Query Sequence		D	L	N	Q	P	R	V	V	A	I	V	E	V	D	S	G	Q	L	G	V	D	S	A	.	.	.	.	.	M	A	E	L	Q	Q	L	Q	N	A	L	T	T	P	E	.	.	R	N	N	L	V	A	I	V	S	L	T	E	M	V	V	L	K	P	A	L	N	S	F	G	R	W	D	A	E	D	H	R	K	R	V
Query Conservation																									.	.	.	.	.																.	.
Alig confidence																									.	.	.	.	.																.	.																					.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		R	D	Q	A	Q	L	S	L	L	M	I	D	V	D	Y	F	K	A	Y	N	D	N	F	G	H	L	E	G	D	E	A	L	R	Q	V	A	K	A	I	R	N	S	C	S	R	P	S	D	L	P	A	R	Y	G	G	E	E	F	A	M	V	L	P	N	T	.	.	.	S	P	G	G	A	R	L	L	A	E	K	L
Template Known Secondary structure				T											T	T																														S	T	T								T	T							T	T		.	.	.
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260				.	.	.	.	.	.	.	.	.	270	.	.
		232	.	.	.	.	.	.								.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.																	.
Query SS confidence									.	.	.	.	.	.	.																	.
Query Sequence		E	Q	L	I	T	R	M	.	.	.	.	.	.	.	K	E	Y	G	Q	L	R	F	R	V	S	L	G	N	Y	F	.	T	G	P	G	S	I	A	R	S	Y	R	T	A	K	T	T	M	V	V	G	K	Q	R	M	P	E	S	R	C	Y
Query Conservation									.	.	.	.	.	.	.																	.
Alig confidence									.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		R	Q	S	V	A	G	M	N	I	P	H	I	A	P	V	P	G	S	S	L	T	V	S	I	G	V	A	T	V	T	P	Q	V	G	Q	H	S	R	Q	L	I	L	D	A	D	K	G	L	Y	L	A	K	N	N	G	R	N	Q	V	A	A
Template Known Secondary structure											B				S	S	T	T		B														T	T			T																T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions