Return to main results Retrieve Phyre Job Id

Job DescriptionP37047
Confidence93.33%DateThu Jan 5 11:54:38 GMT 2012
Rank33Aligned Residues121
% Identity12%Templatec3eeaB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:gaf domain/hd domain protein; PDBTitle: the crystal structure of the gaf domain/hd domain protein2 from geobacter sulfurreducens
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20..... ....30......... 40.........50.........60.........70.
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Query Sequence  TKMAQDIVARTMRIIDTN. . . INVMDARGRIIGSG. . . . . . . . . . . DRERIGELHEGALLVLSQGRVVDIDDAVARHL. .
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Template Sequence  DEVIKDLSRLLRKLVKTRWIAVYFFDRDFAPARSTGLPASFLPVFREMPLAPDKIPLLKSMLRKRQHLMLTDPGSSDLLT
Template Known Secondary structure  S

S


S

GGG

B
TTT
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S
GGG
TTS
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   15....20.........30.........40.........50.........60.........70.........80.........90....
 
   72.......80.........90.... .....100.........110.........120........
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Query Sequence  . . . . . . HGVRQGINLPLRLEGEIVGVIGL. . TGEPENLRKYGELVCMTAEMMLEQSRLMHLLAQD
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Template Sequence  PKLRKLLRNLCVLAVPMVVRTQVIGAVFMARTRDNPPFSDAETAIIRDLVSHAALVVSHMQLFDE
Template Known Secondary structure  TTTTTTTS



T
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   98.100.........110.........120.........130.........140.........150.........160..
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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