Job Description P37047 Confidence 88.45% Date Thu Jan 5 11:54:38 GMT 2012 Rank 55 Aligned Residues 196 % Identity 11% Template c3c2wB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:bacteriophytochrome; PDBTitle: crystal structure of the photosensory core domain of p.2 aeruginosa bacteriophytochrome pabphp in the pfr state Resolution 2.90 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.						30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.											.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Query Sequence		T	K	M	A	Q	D	I	V	A	R	T	M	R	I	I	D	T	N	I	N	V	M	.	.	.	.	.	D	A	R	G	R	I	I	G	S	G	D	R	E	R	I	G	E	.	.	.	.	.	.	.	.	.	.	L	H	E	G	A	L	L	V	L	S	Q	G	R	V	V	D	I	D	D	A	V	A	R	H	L	H
Query Conservation																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	L	L	S	N	V	T	D	E	L	R	R	M	T	G	Y	D	R	V	M	A	Y	R	F	R	H	D	D	S	G	E	V	V	A	E	S	R	R	E	D	L	E	S	Y	L	G	Q	R	Y	P	A	S	D	I	P	A	Q	A	R	R	L	Y	I	Q	N	P	I	R	L	I	A	D	V	A	Y	T	P	M	R
Template Known Secondary structure																			S									T	T	S											T	T	S				T	T		B			G	G	G	S												S					S		S	S
Template Predicted Secondary structure
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
																																				73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	R	Q	G	I	N	L	P	L	R	L	E	G	E	I	V	G	V	I	G	L	T	G	.	.	.	.	.	E	P	E	N	L	R	K	Y	G	E	L	V	C	M	T	A	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.
Template Conservation
Template Sequence		V	F	P	A	L	N	P	E	T	N	E	S	F	D	L	S	Y	S	V	L	R	S	V	S	P	I	H	C	E	Y	L	T	N	M	G	V	R	A	S	M	S	I	S	I	V	V	G	G	K	L	W	G	L	F	S	C	H	H	M	S	P	K	L	I	P	Y	P	V	R	M	S	F	Q	I	F	S	Q	V	C	S
Template Known Secondary structure				S	S	B		T	T	T	S	S	B				T	T		S	S	B														T												T	T											S	S													T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.			.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																								.	.
Query SS confidence																								.	.
Query Sequence		M	M	L	E	Q	S	R	L	M	H	L	L	A	Q	D	S	R	L	R	E	E	L	.	.	V	M	N	L	I	Q	A	E	E	N	T	P	A	L	T	E	W	A	Q	R	L	G	I	D	L	N	Q	P	R	V	V	A	I	V	E	V	D	S	G	Q	L	G	V	D	S	A	M	A	E	L	Q	Q	L	Q	N	A
Query Conservation																								.	.
Alig confidence																								.	.
Template Conservation
Template Sequence		A	I	V	E	R	L	E	Q	G	R	I	A	E	L	L	R	V	S	T	E	R	R	L	A	L	A	R	R	A	R	D	A	D	D	L	F	G	A	L	A	H	P	D	D	G	I	A	A	L	I	P	C	D	G	A	L	V	M	L	G	G	R	T	L	S	I	R	G	D	F	E	R	Q	A	G	N	V	L	Q	R
Template Known Secondary structure																													S	T	T	T	S	S		T							S	S	S	S	S	T	T	T	S			S							T	T						S	S											T	T
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		192	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	T	P	E	R	N	N	L	V	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	R	D	P	E	R	D	I	Y	H	T
Template Known Secondary structure		S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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