Job Description P37047 Confidence 38.36% Date Thu Jan 5 11:54:38 GMT 2012 Rank 181 Aligned Residues 112 % Identity 15% Template c2qybA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:membrane protein, putative; PDBTitle: crystal structure of the gaf domain region of putative membrane2 protein from geobacter sulfurreducens pca Resolution 2.40 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.											40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																			.	.	.																.	.	.	.	.	.	.	.	.	.																																	.	.	.
Query SS confidence																			.	.	.																.	.	.	.	.	.	.	.	.	.																																	.	.	.
Query Sequence		T	K	M	A	Q	D	I	V	A	R	T	M	R	I	I	D	T	.	.	.	N	I	N	V	M	D	A	R	G	R	I	I	G	S	G	.	.	.	.	.	.	.	.	.	.	D	R	E	R	I	G	E	L	H	E	G	A	L	L	V	L	S	Q	G	R	V	V	D	I	D	D	A	V	A	R	H	L	.	.	.
Query Conservation																			.	.	.																.	.	.	.	.	.	.	.	.	.																																	.	.	.
Alig confidence																			.	.	.																.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		Q	I	I	X	D	D	L	L	N	L	L	L	K	E	F	K	L	D	L	A	V	I	R	L	V	D	E	K	G	V	L	R	V	R	S	Y	S	G	K	G	I	A	G	I	A	G	K	D	W	E	P	E	I	E	T	Y	I	G	E	A	F	L	S	N	R	L	Q	F	V	N	D	T	Q	Y	X	T	K	P	L	T
Template Known Secondary structure																S	S		S									T	T	S										S		T	T	S	T	T		S		B				T	T	S									T	S					S		G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
								72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	H	G	V	R	Q	G	I	N	L	P	L	R	L	E	G	E	.	I	V	G	V	I	G	L	T	G	E	P	E	N	L	R	K	Y	G	E	L	V	C	M	T	A	E	M	M	L	E	Q	S
Query Conservation		.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.																	.
Template Conservation
Template Sequence		R	E	L	X	Q	K	E	G	I	K	S	F	A	H	I	P	I	S	R	K	G	E	P	P	F	G	I	L	S	V	F	S	R	T	I	V	G	L	F	N	E	P	F	L	N	L	L	E	S	L	A	G	Q	L	A
Template Known Secondary structure								T	T												T	T	S											S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions